RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 EGFL8Q99944 293 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 TRIM54Q9BYV2 358 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 SYNPO2LQ9H987 977 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 MCCC2Q9HCC0 563 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 MRPS30Q9NP92 439 aaKnown RBP17.03■□□□□ 0.32
VCP-202ENST00000417448 INTS7Q9NVH2 962 aaKnown RBP17.03■□□□□ 0.32
VCP-202ENST00000417448 ACOT9Q9Y305 439 aa17.03■□□□□ 0.32
VCP-202ENST00000417448 NADKO95544 446 aaPredicted RBP17.02■□□□□ 0.32
VCP-202ENST00000417448 STATHP02808 62 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 CMPK1P30085 196 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 GDF5P43026 501 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 SERPINB8P50452 374 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 SERPINB9P50453 376 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 NKG7Q16617 165 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 TUBB8Q3ZCM7 444 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 COX15Q7KZN9 410 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 TBC1D1Q86TI0 1168 aaPredicted RBP17.02■□□□□ 0.32
VCP-202ENST00000417448 GPSM1Q86YR5 675 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 OR11G2Q8NGC1 345 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 FBXL8Q96CD0 374 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 MTFMTQ96DP5 389 aaKnown RBP17.02■□□□□ 0.32
VCP-202ENST00000417448 NDC1Q9BTX1 674 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 CCDC177Q9NQR7 707 aaPredicted RBP17.02■□□□□ 0.32
VCP-202ENST00000417448 PLA2G3Q9NZ20 509 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 OARD1Q9Y530 152 aa17.02■□□□□ 0.32
VCP-202ENST00000417448 A0A0J9YVX5 310 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 PABPN1LA6NDY0 278 aaKnown RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 H7BY64 318 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 LTA4HP09960 611 aaKnown RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 CD1EP15812 388 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 HSD17B2P37059 387 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 TNFSF10P50591 281 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 ARG2P78540 354 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 PRDX1Q06830 199 aaKnown RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 INAQ16352 499 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 FRMPD2BQ6IN97 320 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 ADGRD1Q6QNK2 874 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 ADCK2Q7Z695 626 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 ISCA2Q86U28 154 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 MCATQ8IVS2 390 aaKnown RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 EPS8L3Q8TE67 593 aaKnown RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 FKBP10Q96AY3 582 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 PRAP1Q96NZ9 151 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 OR4K3Q96R72 315 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 SOX17Q9H6I2 414 aaPredicted RBP17.01■□□□□ 0.31
VCP-202ENST00000417448 WDR54Q9H977 334 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 SEC14L3Q9UDX4 400 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 RNF112Q9ULX5 631 aa17.01■□□□□ 0.31
VCP-202ENST00000417448 A0A087X1B8 175 aa17■□□□□ 0.31
VCP-202ENST00000417448 LOC105369274A0A096LPK9 316 aa17■□□□□ 0.31
VCP-202ENST00000417448 LOC102723532A0A0G2JNH3 316 aa17■□□□□ 0.31
VCP-202ENST00000417448 ZNF839A8K0R7 811 aa17■□□□□ 0.31
VCP-202ENST00000417448 GOLGA8RI6L899 631 aa17■□□□□ 0.31
VCP-202ENST00000417448 UBXN8O00124 270 aa17■□□□□ 0.31
VCP-202ENST00000417448 TAPBPO15533 448 aa17■□□□□ 0.31
VCP-202ENST00000417448 SNRPAP09012 282 aaKnown RBP17■□□□□ 0.31
VCP-202ENST00000417448 ENO2P09104 434 aaPredicted RBP17■□□□□ 0.31
VCP-202ENST00000417448 CDH1P12830 882 aa17■□□□□ 0.31
VCP-202ENST00000417448 NPPBP16860 134 aa17■□□□□ 0.31
VCP-202ENST00000417448 AGAP20933 346 aa17■□□□□ 0.31
VCP-202ENST00000417448 AP1S2P56377 157 aa17■□□□□ 0.31
VCP-202ENST00000417448 ATP6V0D1P61421 351 aa17■□□□□ 0.31
VCP-202ENST00000417448 MEF2AQ02078 507 aaPredicted RBP17■□□□□ 0.31
VCP-202ENST00000417448 ILF2Q12905 390 aaKnown RBP17■□□□□ 0.31
VCP-202ENST00000417448 TGFBIQ15582 683 aa17■□□□□ 0.31
VCP-202ENST00000417448 FBXO42Q6P3S6 717 aa17■□□□□ 0.31
VCP-202ENST00000417448 TLDC1Q6P9B6 456 aa17■□□□□ 0.31
VCP-202ENST00000417448 OVCH1Q7RTY7 1134 aa17■□□□□ 0.31
VCP-202ENST00000417448 ADAMTSL2Q86TH1 951 aa17■□□□□ 0.31
VCP-202ENST00000417448 PAQR7Q86WK9 346 aa17■□□□□ 0.31
VCP-202ENST00000417448 OR4N4Q8N0Y3 316 aa17■□□□□ 0.31
VCP-202ENST00000417448 CYP4X1Q8N118 509 aa17■□□□□ 0.31
VCP-202ENST00000417448 DTWD1Q8N5C7 304 aa17■□□□□ 0.31
VCP-202ENST00000417448 ACBD4Q8NC06 268 aa17■□□□□ 0.31
VCP-202ENST00000417448 OR56A3Q8NH54 315 aa17■□□□□ 0.31
VCP-202ENST00000417448 KIAA1191Q96A73 305 aa17■□□□□ 0.31
VCP-202ENST00000417448 TSNARE1Q96NA8 513 aa17■□□□□ 0.31
VCP-202ENST00000417448 GPR78Q96P69 363 aa17■□□□□ 0.31
VCP-202ENST00000417448 TMUB1Q9BVT8 246 aa17■□□□□ 0.31
VCP-202ENST00000417448 SGPP1Q9BX95 441 aa17■□□□□ 0.31
VCP-202ENST00000417448 CHRNA10Q9GZZ6 450 aa17■□□□□ 0.31
VCP-202ENST00000417448 NMRAL1Q9HBL8 299 aa17■□□□□ 0.31
VCP-202ENST00000417448 IRAK4Q9NWZ3 460 aa17■□□□□ 0.31
VCP-202ENST00000417448 EURLQ9NYK6 297 aa17■□□□□ 0.31
VCP-202ENST00000417448 CD274Q9NZQ7 290 aa17■□□□□ 0.31
VCP-202ENST00000417448 CTSFQ9UBX1 484 aa17■□□□□ 0.31
VCP-202ENST00000417448 ZNF180Q9UJW8 692 aa17■□□□□ 0.31
VCP-202ENST00000417448 TRAV17A0A0B4J275 112 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 A0A1W2PPM1 405 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 SUPT3HB4E1H0 165 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 HAT1O14929 419 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 SUPT3HO75486 399 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 CLDN14O95500 239 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 F10P00742 488 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ANXA5P08758 320 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 ALAS2P22557 587 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 SOX11P35716 441 aa16.99■□□□□ 0.31
VCP-202ENST00000417448 MAGEA12P43365 314 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms