RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 HTR1EP28566 365 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 LIPAP38571 399 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 MMP12P39900 470 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PSMB10P40306 273 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SUOXP51687 545 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 GFERP55789 205 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PDE1BQ01064 536 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ENPEPQ07075 957 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 EPS8Q12929 822 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PDCLQ13371 301 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 EIF4EBP2Q13542 120 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 UGP2Q16851 508 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 C5orf22Q49AR2 442 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ZNF766Q5HY98 468 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 FAM69AQ5T7M9 428 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 RAET1GQ6H3X3 334 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PNCKQ6P2M8 343 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 FAM199XQ6PEV8 388 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TMCO3Q6UWJ1 677 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SPNS3Q6ZMD2 512 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ZNF517Q6ZMY9 492 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 C11orf57Q6ZUT1 292 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 FAM183BPQ6ZVS7 135 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TMEM110Q86TL2 294 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SYVN1Q86TM6 617 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 C17orf82Q86X59 251 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 HPS6Q86YV9 775 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 VRK3Q8IV63 474 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PELI3Q8N2H9 469 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 GALNT4Q8N4A0 578 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 METTL25Q8N6Q8 603 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SIRT6Q8N6T7 355 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ENDOVQ8N8Q3 282 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 LINC00301Q8NCQ3 95 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 CPEB3Q8NE35 698 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SRFBP1Q8NEF9 429 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 RP9Q8TA86 221 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TMEM174Q8WUU8 243 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 MR1Q95460 341 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 CTHRC1Q96CG8 243 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 NUS1Q96E22 293 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PAGE5Q96GU1 130 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ZNF396Q96N95 335 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TGM7Q96PF1 710 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 OR2M4Q96R27 311 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 NR1H4Q96RI1 486 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 RUFY1Q96T51 708 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 DPCDQ9BVM2 203 aaPredicted RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TBC1D10AQ9BXI6 508 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ACTRT3Q9BYD9 372 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ALOXE3Q9BYJ1 711 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 CHST11Q9NPF2 352 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 LHX9Q9NQ69 397 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SNX15Q9NRS6 342 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TRNAU1APQ9NX07 287 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ALKBH4Q9NXW9 302 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 CNOT8Q9UFF9 292 aaKnown RBP4.4□□□□□ -1.71
PTPRK-210ENST00000415055 ZNHIT2Q9UHR6 403 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 PACSIN3Q9UKS6 424 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 STAP1Q9ULZ2 295 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SNX7Q9UNH6 387 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 SLC12A4Q9UP95 1085 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 B3GNT3Q9Y2A9 372 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 TMEM5Q9Y2B1 443 aa4.4□□□□□ -1.71
PTPRK-210ENST00000415055 A0A1B0GUH1 482 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 SEC14L2O76054 403 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 ALPPP05187 535 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 HOXC4P09017 264 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CD99P14209 185 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CD1EP15812 388 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CREB1P16220 341 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 SYT1P21579 422 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 SSTR2P30874 369 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 FASLGP48023 281 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 RPL34P49207 117 aaKnown RBP4.39□□□□□ -1.71
PTPRK-210ENST00000415055 FMO5P49326 533 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CXCR3P49682 368 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 RPS6KA3P51812 740 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CDH15P55291 814 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 EIF3BP55884 814 aaKnown RBP4.39□□□□□ -1.71
PTPRK-210ENST00000415055 HDAC4P56524 1084 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 SNX16P57768 344 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 FOXL2P58012 376 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CETN1Q12798 172 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 ART3Q13508 389 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 IL11RAQ14626 422 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 VWA5B1Q5TIE3 1220 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 PAPD7Q5XG87 772 aaKnown RBP4.39□□□□□ -1.71
PTPRK-210ENST00000415055 BRAT1Q6PJG6 821 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 CYP20A1Q6UW02 462 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 ADGRG6Q86SQ4 1221 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 SLC9B2Q86UD5 537 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 TRIM74Q86UV6 250 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 FAM131BQ86XD5 332 aa4.39□□□□□ -1.71
PTPRK-210ENST00000415055 DNAAF5Q86Y56 855 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms