RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ONECUT2O95948 504 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 TGFB1P01137 390 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 SLC35G6P0C7Q6 338 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 EPHA3P29320 983 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 NOVA1P51513 510 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 VSX2P58304 361 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 RAE1P78406 368 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 PHEXP78562 749 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 HMGCS1Q01581 520 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 EMX2Q04743 252 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 FAM53BQ14153 422 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 IL11RAQ14626 422 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 LSM12Q3MHD2 195 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 SGO1Q5FBB7 561 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 PHF19Q5T6S3 580 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 HES3Q5TGS1 186 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 YOD1Q5VVQ6 348 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 TLDC1Q6P9B6 456 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 ZNF655Q8N720 491 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 CSNK1A1LQ8N752 337 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.39
CNN3-203ENST00000415017 UTP15Q8TED0 518 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 GAL3ST3Q96A11 431 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 RERGQ96A58 199 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 APIPQ96GX9 242 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 PPP3R2Q96LZ3 170 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 C10orf90Q96M02 699 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 F2RL3Q96RI0 385 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 MACROD1Q9BQ69 325 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 B3GNT4Q9C0J1 378 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 REXO4Q9GZR2 422 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 SPRTNQ9H040 489 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 WDR55Q9H6Y2 383 aaPredicted RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 DDX31Q9H8H2 851 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 RIC8BQ9NVN3 520 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 NMRK1Q9NWW6 199 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 ADAM29Q9UKF5 820 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 CLCA2Q9UQC9 943 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 MRPS2Q9Y399 296 aaKnown RBP12.64□□□□□ -0.39
CNN3-203ENST00000415017 TMED5Q9Y3A6 229 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 WDFY3Q8IZQ1 3526 aa12.64□□□□□ -0.39
CNN3-203ENST00000415017 ATP6AP2A0A1C7CYW4 349 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 FOXS1O43638 330 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 HYAL3O43820 417 aaPredicted RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 ATP6AP2O75787 350 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 CSTF2P33240 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
CNN3-203ENST00000415017 PPM1FP49593 454 aaPredicted RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 ARL4DP49703 201 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 ITGA1P56199 1179 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 CLDN6P56747 220 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 STXBP1P61764 594 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 CYP4F2P78329 520 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 RGS1Q08116 209 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
CNN3-203ENST00000415017 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 SPIN4Q56A73 249 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 METTL21CQ5VZV1 264 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 MRM1Q6IN84 353 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 MED25Q71SY5 747 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 TMPRSS7Q7RTY8 843 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 DGLUCYQ7Z3D6 616 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 SPATA21Q7Z572 469 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 CPLX4Q7Z7G2 160 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 DDIASQ8IXT1 998 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 SRFBP1Q8NEF9 429 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 RGMAQ96B86 450 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 TEFMQ96QE5 360 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 ELAC2Q9BQ52 826 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 TBCDQ9BTW9 1192 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 MRPL1Q9BYD6 325 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 SPRY4Q9C004 299 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 ZNF385DQ9H6B1 395 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 SYNDIG1Q9H7V2 258 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 CLK4Q9HAZ1 481 aaKnown RBP12.63□□□□□ -0.39
CNN3-203ENST00000415017 TCF7L2Q9NQB0 619 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 SERTAD3Q9UJW9 196 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 SLC12A4Q9UP95 1085 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 PCDHB3Q9Y5E6 796 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 PCDHGA3Q9Y5H0 932 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 NUP210LQ5VU65 1888 aa12.63□□□□□ -0.39
CNN3-203ENST00000415017 CCDC187A0A096LP49 1063 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 URADA6NGE7 173 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 TMEM150CB9EJG8 249 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 GALR3O60755 368 aaPredicted RBP12.62□□□□□ -0.39
CNN3-203ENST00000415017 OR2B3O76000 313 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 ALDOCP09972 364 aaKnown RBP12.62□□□□□ -0.39
CNN3-203ENST00000415017 CCL4P13236 92 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 PCSK2P16519 638 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 ALOX12P18054 663 aa12.62□□□□□ -0.39
CNN3-203ENST00000415017 LBPP18428 481 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms