RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CFAP47Q6ZTR5 3102 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 LAMA5O15230 3695 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 IDSB3KWA1 339 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 GALR3O60755 368 aaPredicted RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 ALPPP05187 535 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 ZNF888P0CJ79 500 aaPredicted RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 ACPPP15309 386 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 GCAP28676 217 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 XCR1P46094 333 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 MAT1AQ00266 395 aaKnown RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 PCDH1Q08174 1060 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 AIMP2Q13155 320 aaKnown RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 RASA2Q15283 850 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 MINDY4Q4G0A6 757 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 DEFB134Q4QY38 66 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 LACTB2Q53H82 288 aaPredicted RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 DCAF10Q5QP82 559 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 TCTN3Q6NUS6 607 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 CHSY3Q70JA7 882 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 PPP1R32Q7Z5V6 425 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHD1-202ENST00000414220 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 DTWD1Q8N5C7 304 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 AMER3Q8N944 861 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 PPP4R1Q8TF05 950 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 PHF21BQ96EK2 531 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 OR1F2PQ96R84 312 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 REXO4Q9GZR2 422 aaKnown RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 RHBGQ9H310 441 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 IPPKQ9H8X2 491 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 COPS7BQ9H9Q2 264 aaPredicted RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 ZNF358Q9NW07 568 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 HCN3Q9P1Z3 774 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 MKL2Q9ULH7 1088 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 MRPS2Q9Y399 296 aaKnown RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 PCDHGA9Q9Y5G4 932 aaKnown RBP13.93□□□□□ -0.18
CHD1-202ENST00000414220 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
CHD1-202ENST00000414220 SMIM23A6NLE4 172 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 GLRA3O75311 464 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 RDH16O75452 317 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 WFS1O76024 890 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 BMP10O95393 424 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 C8orf89P0DMQ9 161 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 PCNAP12004 261 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 HSD17B3P37058 310 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 SLCO1A2P46721 670 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 PGDP52209 483 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 RAB8AP61006 207 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 NFATC3Q12968 1075 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 CHAF1BQ13112 559 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 SYT16Q17RD7 645 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 ERCC6LQ2NKX8 1250 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 GRHL2Q6ISB3 625 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 SLC22A9Q8IVM8 553 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 RIBC1Q8N443 379 aaPredicted RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 UTP15Q8TED0 518 aaKnown RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 CREB3L4Q8TEY5 395 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 CCDC126Q96EE4 140 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 MOCOSQ96EN8 888 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 NPLQ9BXD5 320 aaPredicted RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 ROPN1BQ9BZX4 212 aaPredicted RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 EPB41L4BQ9H329 900 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 ROPN1Q9HAT0 212 aaPredicted RBP13.92□□□□□ -0.18
CHD1-202ENST00000414220 GPR83Q9NYM4 423 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 ZNF451Q9Y4E5 1061 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 HS3ST3B1Q9Y662 390 aa13.92□□□□□ -0.18
CHD1-202ENST00000414220 NSG1A0A0A6YYJ2 146 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 TLDC2A0PJX2 215 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 LRIT2A6NDA9 550 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 A6NL46 340 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ERI3O43414 337 aaKnown RBP13.91□□□□□ -0.18
CHD1-202ENST00000414220 B3GALT2O43825 422 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ALOX12BO75342 701 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 CLDN9O95484 217 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 HPP00738 406 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 SHBGP04278 402 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 PYGBP11216 843 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ICAM2P13598 275 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 CCNG1P51959 295 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 BTN3A2P78410 334 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 E2F2Q14209 437 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 TMEM35AQ53FP2 167 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 C10orf62Q5T681 223 aaPredicted RBP13.91□□□□□ -0.18
CHD1-202ENST00000414220 CPZQ66K79 652 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 NDUFAF7Q7L592 441 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 PRSS41Q7RTY9 318 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ZC3H7AQ8IWR0 971 aaKnown RBP13.91□□□□□ -0.18
CHD1-202ENST00000414220 GALNT16Q8N428 558 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 TEX19Q8NA77 164 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ARMC2Q8NEN0 867 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 OR2L5Q8NG80 312 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 ADAMTS18Q8TE60 1221 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 TM9SF4Q92544 642 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 TBC1D20Q96BZ9 403 aa13.91□□□□□ -0.18
CHD1-202ENST00000414220 CMTM7Q96FZ5 175 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms