RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RRBP1Q9P2E9 1410 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 LOC100509620A0A075B734 347 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 A0A1W2PQM1 296 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TCRBV5S2A0A599 114 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PIPSLA2A3N6 862 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 C17orf102A2RUQ5 167 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A18PA6NE21 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A16PA6NEW6 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GAGE10A6NGK3 116 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A20PA6NIJ5 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SDR42E2A6NKP2 422 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A9PA6NNJ1 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ERI2A8K979 691 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 YDJCA8MPS7 323 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ARHGEF33A8MVX0 844 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A5PA8MXJ8 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KCNU1A8MYU2 1149 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF561-AS1K7EIQ3 104 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NRP1O14786 923 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MID1O15344 667 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RNF13O43567 381 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 DFNA5O60443 496 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CST8O60676 142 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EIF1BO60739 113 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CTNSO60931 367 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ITGA10O75578 1167 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GLCEO94923 617 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NADKO95544 446 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 LDOC1O95751 146 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SYF2O95926 243 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PEX11BO96011 259 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 AMHP03971 560 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PGK2P07205 417 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GP1BAP07359 652 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GUSBP08236 651 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZDHHC11BP0C7U3 371 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A15PP0C7V4 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM90A14PP0C7W9 464 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 LINC00614P0C842 121 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RNF224P0DH78 156 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GIMD1P0DJR0 217 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CBSLP0DN79 551 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CYP4B1P13584 511 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PSMC3P17980 439 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 XRCC1P18887 633 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ATP6V1C1P21283 382 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 UGT1A1P22309 533 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 F8A1P23610 371 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CD40P25942 277 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 HOXC9P31274 260 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PHBP35232 272 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CBSP35520 551 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TGFBR2P37173 567 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 IGHMBP2P38935 993 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EIF1P41567 113 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRCPP42785 496 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MAGEA6P43360 314 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 OMPP47874 163 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CACNA2D1P54289 1103 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MFAP4P55083 255 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MANFP55145 182 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 WNT3P56703 355 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RGS8P57771 180 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CSNK2A1P68400 391 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SIM1P81133 766 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CDK16Q00536 496 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 STX3Q13277 289 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TOP3AQ13472 1001 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 IL10RAQ13651 578 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EMC2Q15006 297 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZNHIT3Q15649 155 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF174Q15697 407 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NAB2Q15742 525 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FAM189A2Q15884 450 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SLC15A2Q16348 729 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SNAPC1Q16533 368 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TRIM16LQ309B1 348 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KLHL12Q53G59 568 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KLHL22Q53GT1 634 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CT83Q5H943 113 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EMC4Q5J8M3 183 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PDSS1Q5T2R2 415 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 C20orf194Q5TEA3 1177 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF5Q5TYX0 476 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GPR107Q5VW38 600 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF8Q5VWM4 474 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF9Q5VWM5 478 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF6Q5VXH4 476 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 LIPJQ5W064 366 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PAPD7Q5XG87 772 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ALS2CLQ60I27 953 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ATG9BQ674R7 924 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZFP1Q6P2D0 407 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 BHLHB9Q6PI77 547 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 BRAT1Q6PJG6 821 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CD300LDQ6UXZ3 194 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC74BQ6ZQY2 392 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RNF207Q6ZRF8 634 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SYT13Q7L8C5 426 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GSTA5Q7RTV2 222 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms