RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 K7EM74 188 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 MASP2O00187 686 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 JRKO75564 520 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 CLEC3AO75596 197 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 WFS1O76024 890 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 B3GALT4O96024 378 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 PDGFAP04085 211 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 SHBGP04278 402 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 ZNF888P0CJ79 500 aaPredicted RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 ACPPP15309 386 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 EPB42P16452 691 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 GSTM2P28161 218 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 HNF4AP41235 474 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 XCR1P46094 333 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 EMP2P54851 167 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 RAB8AP61006 207 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 VSNL1P62760 191 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 SKP1P63208 163 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 LAPTM5Q13571 262 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 PCBP2Q15366 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 LACTB2Q53H82 288 aaPredicted RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 PAGE2BQ5JRK9 111 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 TOR1AIP1Q5JTV8 583 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 ADNP2Q6IQ32 1131 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 NIPAL1Q6NVV3 410 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 ABHD13Q7L211 337 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 VN1R5Q7Z5H4 357 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 TEX9Q8N6V9 391 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 PTGR2Q8N8N7 351 aaPredicted RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 OR11G2Q8NGC1 345 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 OR5T3Q8NGG3 340 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 OR51Q1Q8NH59 317 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 MZB1Q8WU39 189 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 SCYL1Q96KG9 808 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 MRPL57Q9BQC6 102 aaKnown RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 SLC25A23Q9BV35 468 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 KLHL31Q9H511 634 aa9.53□□□□□ -0.88
TMEM248-202ENST00000413593 PCDHGA9Q9Y5G4 932 aaKnown RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 TNPO3Q9Y5L0 923 aaKnown RBP9.53□□□□□ -0.88
TMEM248-202ENST00000413593 HEATR5BQ9P2D3 2071 aa9.52□□□□□ -0.88
TMEM248-202ENST00000413593 A0A1W2PQ72 361 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ANKDD1BA6NHY2 528 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 A6NL46 340 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 C4orf51C9J302 202 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 CHST10O43529 356 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 DNAJB6O75190 326 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ALOX12BO75342 701 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SIX3O95343 332 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 HEXBP07686 556 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SBK3P0C264 359 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SMIM10L1P0DMW3 83 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 NR1D1P20393 614 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 HNRNPH1P31943 449 aaKnown RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 EFNA3P52797 238 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SOX8P57073 446 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 STXBP1P61764 594 aaKnown RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 HIST2H2ACQ16777 129 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ADPRMQ3LIE5 342 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 TUBB8Q3ZCM7 444 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 HIST2H2AA3Q6FI13 130 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 FAAH2Q6GMR7 532 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 METTL2BQ6P1Q9 378 aaKnown RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ASB18Q6ZVZ8 466 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 CNPY4Q8N129 248 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 GALNT16Q8N428 558 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 TMEM151AQ8N4L1 468 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 CLEC1AQ8NC01 280 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 FDCSPQ8NFU4 85 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ACMSDQ8TDX5 336 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 CCT6BQ92526 530 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 GAL3ST3Q96A11 431 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 C8orf44Q96CB5 159 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 MS4A6EQ96DS6 147 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SMIM10Q96HG1 83 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 VPS50Q96JG6 964 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 OR1F2PQ96R84 312 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 NUDT9Q9BW91 350 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 VN1R1Q9GZP7 353 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 RHBGQ9H310 441 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 PPCSQ9HAB8 311 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 CLK4Q9HAZ1 481 aaKnown RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 TBK1Q9UHD2 729 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 MKL2Q9ULH7 1088 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 TMCO1Q9UM00 188 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 ANGPTL3Q9Y5C1 460 aa9.52□□□□□ -0.89
TMEM248-202ENST00000413593 V9GYY5 206 aaPredicted RBP9.52□□□□□ -0.89
TMEM248-202ENST00000413593 PCM1Q15154 2024 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 COL6A6A6NMZ7 2263 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 LOC102723996A0A087X1L8 192 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 LRIT2A6NDA9 550 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 STX16-NPEPL1H3BU86 382 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 E2F3O00716 465 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 STX16O14662 325 aa9.51□□□□□ -0.89
TMEM248-202ENST00000413593 PCDH17O14917 1159 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms