RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TSPAN16Q9UKR8 245 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 POMT2Q9UKY4 750 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 PIN4Q9Y237 131 aaKnown RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 SH3GLB1Q9Y371 365 aa4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 MTF2Q9Y483 593 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P31-201ENST00000413333 NPHP3Q7Z494 1330 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 A0A0G2JLW4 131 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 MACROD2A1Z1Q3 448 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 MTMR11A4FU01 709 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 SMIM1B2RUZ4 78 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF732B4DXR9 585 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 P2RY10O00398 339 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 CHUKO15111 745 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 MAGEB2O15479 319 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 MLNRO43193 412 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 TXNL1O43396 289 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 GPIP06744 558 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 PRSS1P07477 247 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 B4GALT1P15291 398 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF18P17022 549 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 CCNA2P20248 432 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 IL10P22301 178 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 ITGA3P26006 1051 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC1A3P43003 542 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 HNRNPFP52597 415 aaKnown RBP4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 KCNJ10P78508 379 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 ITGA9Q13797 1035 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 GIT2Q14161 759 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 RBBP5Q15291 538 aaKnown RBP4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 KRT31Q15323 416 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 LRRC37A5PQ49AS3 106 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 CCDC40Q4G0X9 1142 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR6B2Q6IFH4 312 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 C19orf48Q6RUI8 117 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 WDR88Q6ZMY6 472 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 C17orf107Q6ZR85 190 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 C1orf186Q6ZWK4 172 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 STHQ8IWL8 128 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 GPC2Q8N158 579 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 NIPA2Q8N8Q9 360 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 RNF149Q8NC42 400 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM185AQ8NFB2 350 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR1L3Q8NH93 324 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 SPATA18Q8TC71 538 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 TAF4BQ92750 862 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 NECTIN4Q96NY8 510 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 LPAR4Q99677 370 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 LRRC2Q9BYS8 371 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 HSD3B7Q9H2F3 369 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF334Q9HCZ1 680 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 KCNMB3Q9NPA1 279 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 EXOC1Q9NV70 894 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 PANK4Q9NVE7 773 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 HPF1Q9NWY4 346 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 HACD3Q9P035 362 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 POLKQ9UBT6 870 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 PILRBQ9UKJ0 227 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 EXOC7Q9UPT5 735 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 SATB2Q9UPW6 733 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 NUDCQ9Y266 331 aa4.26□□□□□ -1.73
HMGB3P31-201ENST00000413333 STK36Q9NRP7 1315 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 CFAP73A6NFT4 308 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ARHGAP42A6NI28 874 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC28A1O00337 649 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 CLN5O75503 358 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 CDC123O75794 336 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 MT-ATP6P00846 226 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC2A2P11168 524 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 MAGEA11P43364 429 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 CNN1P51911 297 aaKnown RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 KCNK10P57789 538 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 DCDC1P59894 354 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 SGCGQ13326 291 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TSTA3Q13630 321 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TMEM132DQ14C87 1099 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 PTPN14Q15678 1187 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF74Q16587 644 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF718Q3SXZ3 478 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF672Q499Z4 452 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TAF1BQ53T94 588 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 PRAMEF7Q5VXH5 474 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 SLC27A4Q6P1M0 643 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 MACC1Q6ZN28 852 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM43BQ6ZT52 329 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 FCRLAQ7L513 359 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 TRMT11Q7Z4G4 463 aaKnown RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 ZNF444Q8N0Y2 327 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 FAM89BQ8N5H3 189 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 MRPL43Q8N983 215 aaKnown RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 OR2T11Q8NH01 316 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 UBTD2Q8WUN7 234 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 APOBEC4Q8WW27 367 aaKnown RBP4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 C10orf90Q96M02 699 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 NSMCE2Q96MF7 247 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 GUCD1Q96NT3 240 aa4.25□□□□□ -1.73
HMGB3P31-201ENST00000413333 NYXQ9GZU5 481 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms