RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PPP1R3AQ16821 1122 aa18.05■□□□□ 0.48
CPSF7-204ENST00000413232 STEAP4Q687X5 459 aa18.05■□□□□ 0.48
CPSF7-204ENST00000413232 UTP15Q8TED0 518 aaKnown RBP18.05■□□□□ 0.48
CPSF7-204ENST00000413232 TBC1D20Q96BZ9 403 aa18.05■□□□□ 0.48
CPSF7-204ENST00000413232 NAT9Q9BTE0 207 aa18.05■□□□□ 0.48
CPSF7-204ENST00000413232 TSPAN10Q9H1Z9 355 aaPredicted RBP18.05■□□□□ 0.48
CPSF7-204ENST00000413232 KLHL31Q9H511 634 aa18.05■□□□□ 0.48
CPSF7-204ENST00000413232 CSMD2Q7Z408 3487 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 PDZD2O15018 2839 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 CDC7O00311 574 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 ZNHIT1O43257 154 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 HNRNPRO43390 633 aaKnown RBP18.04■□□□□ 0.48
CPSF7-204ENST00000413232 B4GALT2O60909 372 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 HNF4AP41235 474 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 OR4D2P58180 307 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 ZNF460Q14592 562 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 OR1C1Q15619 314 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 STRA8Q7Z7C7 330 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 NT5CQ8TCD5 201 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 ELP5Q8TE02 316 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 SLC5A11Q8WWX8 675 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 SCMH1Q96GD3 660 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 PDLIM5Q96HC4 596 aaKnown RBP18.04■□□□□ 0.48
CPSF7-204ENST00000413232 LPAR4Q99677 370 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 CDCP1Q9H5V8 836 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 ZFP69BQ9UJL9 534 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 PCDHGB6Q9Y5F9 930 aa18.04■□□□□ 0.48
CPSF7-204ENST00000413232 GABRR3A8MPY1 467 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 FAM227AF5H4B4 570 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 NEURL1O76050 574 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 SMIM10L1P0DMW3 83 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 IL10P22301 178 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 TNFRSF8P28908 595 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 RAB8AP61006 207 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 ART3Q13508 389 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 CSHL1Q14406 222 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 C3AR1Q16581 482 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 FAM45BPQ6NSW5 357 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 MRGPRGQ86SM5 289 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 ZNF227Q86WZ6 799 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 GABPB2Q8TAK5 448 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-204ENST00000413232 FAM45AQ8TCE6 357 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 SMIM10Q96HG1 83 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 UTP23Q9BRU9 249 aaKnown RBP18.03■□□□□ 0.48
CPSF7-204ENST00000413232 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 TRIM54Q9BYV2 358 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 TINAGQ9UJW2 476 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 SLC22A14Q9Y267 594 aa18.03■□□□□ 0.48
CPSF7-204ENST00000413232 TEP1Q99973 2627 aaKnown RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 ASPDHA6ND91 283 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 TTI1O43156 1089 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 SLC19A2O60779 497 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 MYBL2P10244 700 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 ZNF37AP17032 561 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 MAOAP21397 527 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 SAT1P21673 171 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 AHRP35869 848 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 ADORA2A-AS1P86434 159 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 REEP5Q00765 189 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 FASTKD3Q14CZ7 662 aaKnown RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 MORF4L2Q15014 288 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 CDSNQ15517 529 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 C18orf21Q32NC0 220 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 GALNTL5Q7Z4T8 443 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 THOC6Q86W42 341 aaKnown RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 ANKMY2Q8IV38 441 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 KLHL7Q8IXQ5 586 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 PDIK1LQ8N165 341 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 ANKRD49Q8WVL7 239 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 CAPZA3Q96KX2 299 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 FRMD6Q96NE9 622 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 PTCHD1Q96NR3 888 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 SLC6A16Q9GZN6 736 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 NECTIN3Q9NQS3 549 aa18.02■□□□□ 0.48
CPSF7-204ENST00000413232 CORO1CQ9ULV4 474 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-204ENST00000413232 DNAJC13O75165 2243 aa18.02■□□□□ 0.47
CPSF7-204ENST00000413232 ZNF407Q9C0G0 2248 aa18.02■□□□□ 0.47
CPSF7-204ENST00000413232 ADGRG4Q8IZF6 3080 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 NPEPPSL1A6NEC2 478 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 PIAS1O75925 651 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 ENO2P09104 434 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-204ENST00000413232 ITGA8P53708 1063 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 RGS1Q08116 209 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 RNFT1Q5M7Z0 435 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 NXPE4Q6UWF7 544 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-204ENST00000413232 TMPRSS11BQ86T26 416 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 ZC3HC1Q86WB0 502 aaKnown RBP18.01■□□□□ 0.47
CPSF7-204ENST00000413232 RPS19BP1Q86WX3 136 aaKnown RBP18.01■□□□□ 0.47
CPSF7-204ENST00000413232 CREG2Q8IUH2 290 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 SIAH3Q8IW03 269 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 CYP4X1Q8N118 509 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 SLC5A8Q8N695 610 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 NFAM1Q8NET5 270 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-204ENST00000413232 ADAMTS18Q8TE60 1221 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 CREB3L4Q8TEY5 395 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 ATL1Q8WXF7 558 aa18.01■□□□□ 0.47
CPSF7-204ENST00000413232 GPR137Q96N19 417 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms