RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 COL26A1Q96A83 441 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 FKBP10Q96AY3 582 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 MECRQ9BV79 373 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 GPR87Q9BY21 358 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 RHBGQ9H310 441 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 GSTO2Q9H4Y5 243 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 ANKHQ9HCJ1 492 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 ZNF225Q9UK10 706 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 CDC14AQ9UNH5 594 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 SLC22A7Q9Y694 548 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 PCSK5Q92824 1860 aa13.24□□□□□ -0.29
CPNE1-206ENST00000412056 ANKRD11Q6UB99 2663 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-206ENST00000412056 CACNA1BQ00975 2339 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 A0A0G2JN53 185 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 SGK494L7N484 410 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 AGPSO00116 658 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 NKX2-8O15522 239 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 SH3BGRLO75368 114 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 RDH16O75452 317 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 CREG1O75629 220 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 OR4F21O95013 312 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 OTCP00480 354 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 MYZAPP0CAP1 466 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 PRKAR1AP10644 381 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-206ENST00000412056 ALOX12P18054 663 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 CCR10P46092 362 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 AVPR1BP47901 424 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 DNAJB13P59910 316 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 RAB8AP61006 207 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 MAT1AQ00266 395 aaKnown RBP13.23□□□□□ -0.29
CPNE1-206ENST00000412056 CDC20Q12834 499 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 IL10RAQ13651 578 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
CPNE1-206ENST00000412056 DSG2Q14126 1118 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 ZRSR2Q15696 482 aaKnown RBP13.23□□□□□ -0.29
CPNE1-206ENST00000412056 DEFB134Q4QY38 66 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 OVCH1Q7RTY7 1134 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 MILR1Q7Z6M3 343 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 C10orf107Q8IVU9 208 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 AFAP1L2Q8N4X5 818 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 GAL3ST3Q96A11 431 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 SEC16BQ96JE7 1060 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 MS4A8Q9BY19 250 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 TMBIM4Q9HC24 238 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 OXSMQ9NWU1 459 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 TCFL5Q9UL49 500 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 NAALAD2Q9Y3Q0 740 aa13.23□□□□□ -0.29
CPNE1-206ENST00000412056 MED13Q9UHV7 2174 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 LRIT2A6NDA9 550 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 URADA6NGE7 173 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 H0YIG0 161 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 H0YIV9 168 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 PRPF4O43172 522 aaKnown RBP eCLIP13.22□□□□□ -0.292e-8■□□□□ 11.3
CPNE1-206ENST00000412056 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 GALR3O60755 368 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 KLF7O75840 302 aaPredicted RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 TGFB1P01137 390 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 FURINP09958 794 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SMIM10L1P0DMW3 83 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ETV4P43268 484 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 NAGLUP54802 743 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 STXBP1P61764 594 aaKnown RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ERV3-1Q14264 604 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 HERC3Q15034 1050 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 NKG7Q16617 165 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ADPRMQ3LIE5 342 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 GGTA1PQ4G0N0 100 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SHISA6Q6ZSJ9 500 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 HUS1BQ8NHY5 278 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 MS4A6EQ96DS6 147 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SMIM10Q96HG1 83 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 F2RL3Q96RI0 385 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 MTERF1Q99551 399 aaKnown RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SPSB2Q99619 263 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SLC26A1Q9H2B4 701 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 PRORYQ9H606 182 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 SSU72Q9NP77 194 aaKnown RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 DMRT3Q9NQL9 472 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 HCN3Q9P1Z3 774 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 TRPC4Q9UBN4 977 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
CPNE1-206ENST00000412056 PTRH2Q9Y3E5 179 aaKnown RBP13.22□□□□□ -0.29
CPNE1-206ENST00000412056 TSC22D4Q9Y3Q8 395 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms