RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 OR1F1O43749 312 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 GALR3O60755 368 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 B3GALT4O96024 378 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SERPIND1P05546 499 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 NPPBP16860 134 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 JAK1P23458 1154 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CCND1P24385 295 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PTGS2P35354 604 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MAGEA6P43360 314 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HLCSP50747 726 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ITGA8P53708 1063 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MLF1P58340 268 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MEF2AQ02078 507 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DEFB134Q4QY38 66 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CEP128Q6ZU80 1094 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PALM2Q8IXS6 379 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 AFAP1L2Q8N4X5 818 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ZNF740Q8NDX6 193 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FAM57AQ8TBR7 257 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TREX2Q9BQ50 279 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SGPP1Q9BX95 441 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TRIM45Q9H8W5 580 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PARVBQ9HBI1 364 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TRMT6Q9UJA5 497 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HCFC1P51610 2035 aa13.35□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 GOLGA8MH3BSY2 632 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PRMT3O60678 531 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TPOP07202 933 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 C8GP07360 202 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 ALOX12P18054 663 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 TRHRP34981 398 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 RFC3P40938 356 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 MEOX1P50221 254 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CCR8P51685 355 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SKP1P63208 163 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 BTG2P78543 158 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 PWP1Q13610 501 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LRRC8EQ6NSJ5 796 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CD163Q86VB7 1156 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 SULF2Q8IWU5 870 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 LMNTD2Q8IXW0 634 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 CALML6Q8TD86 181 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 AARSD1Q9BTE6 412 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 DEFB126Q9BYW3 111 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HOMER3Q9NSC5 361 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 FBXO5Q9UKT4 447 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 HRH3Q9Y5N1 445 aa13.34□□□□□ -0.27
HLA-DQB2-229ENST00000411527 A8MUA0 341 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 FCHO1O14526 889 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HS6ST1O60243 411 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CEP104O60308 925 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KRT14P02533 472 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ZNF888P0CJ79 500 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MLNP12872 115 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HIST1H2ADP20671 130 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RGS4P49798 205 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PHKG1Q16816 387 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HSP90AA5PQ58FG0 334 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TMEM211Q6ICI0 200 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 UGT3A1Q6NUS8 523 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MYO1HQ8N1T3 1032 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MARVELD2Q8N4S9 558 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SPC24Q8NBT2 197 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 ABHD11Q8NFV4 315 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 OR4K1Q8NGD4 311 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PYCR2Q96C36 320 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SNF8Q96H20 258 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NDNQ99608 321 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 HAUS8Q9BT25 410 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 XAB2Q9HCS7 855 aaKnown RBP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 KLF13Q9Y2Y9 288 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TRBC2A0A5B9 178 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NKX2-6A6NCS4 301 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SAGE2PA6NJ88 616 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SLC16A5O15375 505 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PEX1O43933 1283 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MAOAP21397 527 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 RGS1Q08116 209 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 SP140Q13342 867 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 NIPAL1Q6NVV3 410 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 QSOX2Q6ZRP7 698 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 TBC1D19Q8N5T2 526 aa13.32□□□□□ -0.28
HLA-DQB2-229ENST00000411527 MCUQ8NE86 351 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms