RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CFAP54Q96N23 3096 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 UNC80Q8N2C7 3258 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MAPK8IP3Q9UPT6 1336 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A0U1RQV1 116 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 LOC107986453A0A1B0GWG9 222 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 DYTNA2CJ06 578 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 AGAP5A6NIR3 686 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 DUXAA6NLW8 204 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCT8L1PA6NM43 557 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RASA4BC9J798 803 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RASA4O43374 803 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 COCHO43405 550 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCNQ2O43526 872 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRMUO75648 421 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TOMM70O94826 608 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MBPP02686 304 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEMG1P04279 462 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 HSPB1P04792 205 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 IL4P05112 153 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 C2P06681 752 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCDC159P0C7I6 412 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CECR9P0C854 216 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 B4GALT1P15291 398 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CREB1P16220 341 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF3P17036 446 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGFBP2P18065 325 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 USF1P22415 310 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRKACGP22612 351 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SPRR1AP35321 89 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 HMGCLP35914 325 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MMP12P39900 470 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ALDH3B1P43353 468 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 P2RY4P51582 365 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CAV2P51636 162 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC7A2P52569 658 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 BCAT1P54687 386 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 GSDMDP57764 484 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF280AP59817 542 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CYCSP99999 105 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NAAAQ02083 359 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 COX6A2Q02221 97 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RASGEF1BQ0VAM2 473 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE5Q13069 117 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAGE6Q13070 117 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NOGQ13253 232 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 BLMHQ13867 455 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MRPL58Q14197 206 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 HSP90AA2PQ14568 343 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCTD2Q14681 263 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MLF2Q15773 248 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZKSCAN8Q15776 578 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CLUL1Q15846 466 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 FXNQ16595 210 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 PFKFB4Q16877 469 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NADK2Q4G0N4 442 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC22A6Q4U2R8 563 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF506Q5JVG8 444 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 THEMIS2Q5TEJ8 643 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC22A10Q63ZE4 541 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCTD16Q68DU8 428 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR5M10Q6IEU7 315 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRR27Q6MZM9 219 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TATDN1Q6P1N9 297 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 GGT6Q6P531 493 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 IYDQ6PHW0 289 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NSMFQ6X4W1 530 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TMPRSS11AQ6ZMR5 421 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF620Q6ZNG0 422 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 Q6ZRP5 223 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 BTN2A1Q7KYR7 527 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NUFIP2Q7Z417 695 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ADGRG6Q86SQ4 1221 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF546Q86UE3 836 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TPRA1Q86W33 373 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TBC1D10CQ8IV04 446 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 Q8IYB0 196 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SMAP1Q8IYB5 467 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 KIAA2013Q8IYS2 634 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 IZUMO1Q8IYV9 350 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 METTL4Q8N3J2 472 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CARNMT1Q8N4J0 409 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RAB42Q8N4Z0 105 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CPSF7Q8N684 471 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 IL17RDQ8NFM7 739 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 OR5M1Q8NGP8 315 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MUC7Q8TAX7 377 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SYNPRQ8TBG9 265 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZFPM2Q8WW38 1151 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ATOH1Q92858 354 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 JAKMIP2Q96AA8 810 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MRGPRFQ96AM1 343 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 C10orf35Q96D05 121 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 LRRC3BQ96PB8 259 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 DGAT2Q96PD7 388 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NEDD4LQ96PU5 975 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RNF157Q96PX1 679 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 CCT8L2Q96SF2 557 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TBL1YQ9BQ87 522 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SEC22CQ9BRL7 303 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NOD2Q9HC29 1040 aa-1.8□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms