RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 GNAZP19086 355 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 HNF4AP41235 474 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 ATP6V0D1P61421 351 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 OLR1P78380 273 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 RGS1Q08116 209 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 PRAMEF9Q5VWM5 478 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 CPEB2Q7Z5Q1 589 aaKnown RBP16.7■□□□□ 0.26
LSM5-204ENST00000409909 ANKRD37Q7Z713 158 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 SIRT6Q8N6T7 355 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
LSM5-204ENST00000409909 CATSPER1Q8NEC5 780 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 SMIM10Q96HG1 83 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 RBCK1Q9BYM8 510 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 PTGFRNQ9P2B2 879 aa16.7■□□□□ 0.26
LSM5-204ENST00000409909 SPTAN1Q13813 2472 aaKnown RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 C4orf51C9J302 202 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 CHST10O43529 356 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 CDC123O75794 336 aaPredicted RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 GLRBP48167 497 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 RAB8AP61006 207 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 RHAGQ02094 409 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 CDC16Q13042 620 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 NAB1Q13506 487 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 CDKL4Q5MAI5 379 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 RIPOR1Q6ZS17 1223 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 ISCA2Q86U28 154 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 MMGT1Q8N4V1 131 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 TRPV3Q8NET8 790 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 OR1F2PQ96R84 312 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 BARD1Q99728 777 aaKnown RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 EPS8L2Q9H6S3 715 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 IGSF5Q9NSI5 407 aa16.69■□□□□ 0.26
LSM5-204ENST00000409909 DMGDHQ9UI17 866 aaKnown RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 PTBP2Q9UKA9 531 aaKnown RBP16.69■□□□□ 0.26
LSM5-204ENST00000409909 HIVEP3Q5T1R4 2406 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 HMX2A2RU54 273 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 H2AFYO75367 372 aaKnown RBP16.68■□□□□ 0.26
LSM5-204ENST00000409909 SERPINA6P08185 405 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 IL10P22301 178 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 HSPA7P48741 367 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 SLBPQ14493 270 aaKnown RBP eCLIP16.68■□□□□ 0.26
LSM5-204ENST00000409909 B3GNTL1Q67FW5 361 aaPredicted RBP16.68■□□□□ 0.26
LSM5-204ENST00000409909 TMIGD1Q6UXZ0 262 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 ABHD13Q7L211 337 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.68■□□□□ 0.26
LSM5-204ENST00000409909 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 FAM26EQ8N5C1 309 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 PDPRQ8NCN5 879 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 TBC1D20Q96BZ9 403 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 MRRFQ96E11 262 aaKnown RBP16.68■□□□□ 0.26
LSM5-204ENST00000409909 CNDP1Q96KN2 507 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 DNAJC11Q9NVH1 559 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 PLA2G3Q9NZ20 509 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 WWOXQ9NZC7 414 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 NINJ2Q9NZG7 142 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 CD274Q9NZQ7 290 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 RNF112Q9ULX5 631 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 ASB1Q9Y576 335 aa16.68■□□□□ 0.26
LSM5-204ENST00000409909 COPG1Q9Y678 874 aaKnown RBP16.68■□□□□ 0.26
LSM5-204ENST00000409909 STK16O75716 305 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 WFS1O76024 890 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 TBX6O95947 436 aaPredicted RBP16.67■□□□□ 0.26
LSM5-204ENST00000409909 FHP07954 510 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 ICAM2P13598 275 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 EPORP19235 508 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 TFEBP19484 476 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 CRABP2P29373 138 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 BMPR2Q13873 1038 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 ZNF169Q14929 603 aaPredicted RBP16.67■□□□□ 0.26
LSM5-204ENST00000409909 ABRAXAS2Q15018 415 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 TLR1Q15399 786 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 NR6A1Q15406 480 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 NSDHLQ15738 373 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 TOR1AIP1Q5JTV8 583 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 TSLPQ969D9 159 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 CAPS2Q9BXY5 557 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 CNOT10Q9H9A5 744 aaKnown RBP16.67■□□□□ 0.26
LSM5-204ENST00000409909 GPRC5BQ9NZH0 403 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 COPG2Q9UBF2 871 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 C19orf25Q9UFG5 118 aaPredicted RBP16.67■□□□□ 0.26
LSM5-204ENST00000409909 ZNF490Q9ULM2 529 aaPredicted RBP16.67■□□□□ 0.26
LSM5-204ENST00000409909 CPAMD8Q8IZJ3 1885 aa16.67■□□□□ 0.26
LSM5-204ENST00000409909 URADA6NGE7 173 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 MAGEB17A8MXT2 336 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 B4GALT2O60909 372 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 CBX6O95503 412 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 CD22P20273 847 aa16.66■□□□□ 0.26
LSM5-204ENST00000409909 HNRNPH1P31943 449 aaKnown RBP16.66■□□□□ 0.26
LSM5-204ENST00000409909 TSFMP43897 325 aaKnown RBP16.66■□□□□ 0.26
LSM5-204ENST00000409909 AGTR2P50052 363 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms