RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 MS4A8Q9BY19 250 aa17.24■□□□□ 0.35
PAX3-208ENST00000409828 CHST8Q9H2A9 424 aa17.24■□□□□ 0.35
PAX3-208ENST00000409828 ANKHQ9HCJ1 492 aa17.24■□□□□ 0.35
PAX3-208ENST00000409828 ZNF304Q9HCX3 659 aa17.24■□□□□ 0.35
PAX3-208ENST00000409828 CCDC88CQ9P219 2028 aa17.24■□□□□ 0.35
PAX3-208ENST00000409828 IGLV3-12A0A075B6K2 115 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 C9J4A7 227 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 PPP6CO00743 305 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 KLK10O43240 276 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 MED26O95402 600 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 SERPIND1P05546 499 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 CAPN1P07384 714 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 TCN2P20062 427 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 ITGAXP20702 1163 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 PTX3P26022 381 aaPredicted RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 ARL1P40616 181 aaPredicted RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 TSFMP43897 325 aaKnown RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 UCNP55089 124 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 TGM3Q08188 693 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 TGIF1Q15583 401 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 CRTC2Q53ET0 693 aaPredicted RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 MRPL14Q6P1L8 145 aaKnown RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 LETMD1Q6P1Q0 360 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 CHSY3Q70JA7 882 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 RPS27LQ71UM5 84 aaKnown RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 NUDCD3Q8IVD9 361 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 SPACA3Q8IXA5 215 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 OR2L5Q8NG80 312 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 HUS1BQ8NHY5 278 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 UTP15Q8TED0 518 aaKnown RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 MS4A6EQ96DS6 147 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 CDK15Q96Q40 435 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 CCNL2Q96S94 520 aaPredicted RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 WDR54Q9H977 334 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 AKIRIN1Q9H9L7 192 aaPredicted RBP17.23■□□□□ 0.35
PAX3-208ENST00000409828 ZNF446Q9NWS9 450 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 NDOR1Q9UHB4 597 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 SNX6Q9UNH7 406 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 RAXQ9Y2V3 346 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 USP24Q9UPU5 2620 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 EPG5Q9HCE0 2579 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 ZFHX4Q86UP3 3567 aa17.23■□□□□ 0.35
PAX3-208ENST00000409828 A0A088AWK7 358 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 LOC101059948A0A1B0GTJ6 334 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 A0A1B0GTL3 188 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 SERTM1A2A2V5 107 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 GALR3O60755 368 aaPredicted RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 KRT6AP02538 564 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 KRT6BP04259 564 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 ZNF10P21506 573 aaPredicted RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 IL10P22301 178 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 GRK2P25098 689 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 KRT6CP48668 564 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 RPS15P62841 145 aaKnown RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 CYP4F2P78329 520 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 IFT88Q13099 833 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 DNASE1L3Q13609 305 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 CUL3Q13618 768 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 NCF4Q15080 339 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 DEPDC1Q5TB30 811 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 C1orf189Q5VU69 101 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 FAM198BQ6UWH4 519 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 OVCH1Q7RTY7 1134 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 SYVN1Q86TM6 617 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 CT55Q8WUE5 264 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 SLC45A3Q96JT2 553 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 CENPKQ9BS16 269 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 MECRQ9BV79 373 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 ROGDIQ9GZN7 287 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 REXO4Q9GZR2 422 aaKnown RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 ELOVL6Q9H5J4 265 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 GPN2Q9H9Y4 310 aaPredicted RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 BRF2Q9HAW0 419 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 EML4Q9HC35 981 aaKnown RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 MID1IP1Q9NPA3 183 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 DMRT3Q9NQL9 472 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 SLC22A11Q9NSA0 550 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 NKIRAS1Q9NYS0 192 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 IFT80Q9P2H3 777 aaPredicted RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 CROTQ9UKG9 612 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 NXT1Q9UKK6 140 aaKnown RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 PADI2Q9Y2J8 665 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 MRPS2Q9Y399 296 aaKnown RBP17.22■□□□□ 0.35
PAX3-208ENST00000409828 MAP4K5Q9Y4K4 846 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 PKD1L2Q7Z442 2459 aa17.22■□□□□ 0.35
PAX3-208ENST00000409828 UBFD1O14562 309 aaKnown RBP17.21■□□□□ 0.35
PAX3-208ENST00000409828 OR4F21O95013 312 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 SEMA3DO95025 777 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 FGF4P08620 206 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 PCNAP12004 261 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 HSD3B1P14060 373 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 TSPAN8P19075 237 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 HSD3B2P26439 372 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 HNRNPH1P31943 449 aaKnown RBP17.21■□□□□ 0.35
PAX3-208ENST00000409828 DLSTP36957 453 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 TLE3Q04726 772 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 TTMPQ5BVD1 217 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 HHATQ5VTY9 493 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 BROXQ5VW32 411 aa17.21■□□□□ 0.35
PAX3-208ENST00000409828 KHDRBS2Q5VWX1 349 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms