RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 ERI3O43414 337 aaKnown RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 TNFSF14O43557 240 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 SH3BP5O60239 455 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 CIB2O75838 187 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 KLHL18O94889 574 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 EIF2S1P05198 315 aaKnown RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 GIMD1P0DJR0 217 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 ST6GAL1P15907 406 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 EPHA8P29322 1005 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 BSGP35613 385 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 SSR2P43308 183 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 CAPZBP47756 277 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 SLC7A2P52569 658 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 MAPK12P53778 367 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 ATXN3P54252 364 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 RAB8AP61006 207 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 HYAL2Q12891 473 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 ZIC1Q15915 447 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 OR4F3Q6IEY1 312 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 FRMPD2BQ6IN97 320 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 KLHL35Q6PF15 583 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 UBE3DQ7Z6J8 389 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 ASPGQ86U10 573 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 MMP21Q8N119 569 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 AMER3Q8N944 861 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 KCT2Q8NC54 265 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 TESCQ96BS2 214 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 MS4A6EQ96DS6 147 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 TGM7Q96PF1 710 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 TWSG1Q9GZX9 223 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 SPAG4Q9NPE6 437 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 MCM8Q9UJA3 840 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 POMT2Q9UKY4 750 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 PRPF19Q9UMS4 504 aaKnown RBP11.88□□□□□ -0.51
CHMP3-204ENST00000409727 PCDHGA2Q9Y5H1 932 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 CSNK1G3Q9Y6M4 447 aa11.88□□□□□ -0.51
CHMP3-204ENST00000409727 DYTNA2CJ06 578 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 C4orf51C9J302 202 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 FXYD1O00168 92 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SCAMP2O15127 329 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 CAPN5O15484 640 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 KIF1CO43896 1103 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 ENTPD5O75356 428 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 RASSF9O75901 435 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SEMA3DO95025 777 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 IL3P08700 152 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 LAMP1P11279 417 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 CNR2P34972 360 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 HPCAL1P37235 193 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 KIR3DL1P43629 444 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 ASMTP46597 345 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 RXRGP48443 463 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GFERP55789 205 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 OR1D5P58170 312 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 C2orf80Q0P641 193 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 CEACAM7Q14002 265 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 DUOXA1Q1HG43 343 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 DEFB110Q30KQ9 67 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 TRMT5Q32P41 509 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 AMZ1Q400G9 498 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 COQ5Q5HYK3 327 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 PAGE2Q7Z2X7 111 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 VN1R4Q7Z5H5 301 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GPR180Q86V85 440 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 BAHD1Q8TBE0 780 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 NCSTNQ92542 709 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 ZUFSPQ96AP4 578 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 AHCYL2Q96HN2 611 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 TEFMQ96QE5 360 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 MAP3K3Q99759 626 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SARGQ9BW04 601 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 UCK1Q9HA47 277 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GMEB2Q9UKD1 530 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 A0A1B0GTQ1 180 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SLC9B1P1A6NJY1 282 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GABRR3A8MPY1 467 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 TRIM38O00635 465 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 CASC3O15234 703 aaKnown RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 P2RX6O15547 441 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 KCNH1O95259 989 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 GSNP06396 782 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 PIM1P11309 404 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-204ENST00000409727 SOX11P35716 441 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 MTTPP55157 894 aa11.87□□□□□ -0.51
CHMP3-204ENST00000409727 PIGGQ5H8A4 983 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms