RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CSTF3Q12996 717 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 CUL3Q13618 768 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 TMEM35AQ53FP2 167 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 TOR1AIP1Q5JTV8 583 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 DEPDC1Q5TB30 811 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 KHDRBS2Q5VWX1 349 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 FAM219BQ5XKK7 198 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 RGS9BPQ6ZS82 235 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 ABHD13Q7L211 337 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 AFAP1L2Q8N4X5 818 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF781Q8N8C0 355 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 PROKR1Q8TCW9 393 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 GAL3ST3Q96A11 431 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 MTFMTQ96DP5 389 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 MS4A6EQ96DS6 147 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 MVB12AQ96EY5 273 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 SERPINI1Q99574 410 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 SLC7A5P2Q9GIP4 190 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 REXO4Q9GZR2 422 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 AICDAQ9GZX7 198 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 PRM3Q9NNZ6 103 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 FARSBQ9NSD9 589 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 TXLNGQ9NUQ3 528 aa15.81■□□□□ 0.12
SUMO1-208ENST00000409627 MRPS2Q9Y399 296 aaKnown RBP15.81■□□□□ 0.12
SUMO1-208ENST00000409627 A0A1B0GX78 115 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 TMEM233B4DJY2 109 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 MED26O95402 600 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 CHEK2O96017 543 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 TGFB1P01137 390 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 NTRK1P04629 796 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SMIM10L1P0DMW3 83 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SERPINB3P29508 390 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 RORAP35398 523 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 RPL14P50914 215 aaKnown RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 ARFIP1P53367 373 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 MAP7Q14244 749 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 ABRAXAS2Q15018 415 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 HERC3Q15034 1050 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 UGT3A2Q3SY77 523 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SGO1Q5FBB7 561 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 NIPAL1Q6NVV3 410 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 TTLL10Q6ZVT0 673 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 CHSY3Q70JA7 882 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 GBP7Q8N8V2 638 aaPredicted RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SLC38A9Q8NBW4 561 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SRFBP1Q8NEF9 429 aaKnown RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 OR2L5Q8NG80 312 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 ZCCHC10Q8TBK6 192 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 AGR3Q8TD06 166 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 UTP15Q8TED0 518 aaKnown RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 CLIP3Q96DZ5 547 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 SMIM10Q96HG1 83 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 C7orf26Q96N11 449 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF578Q96N58 590 aaPredicted RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 GBP5Q96PP8 586 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 CENPKQ9BS16 269 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 KLHL31Q9H511 634 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 DHCR7Q9UBM7 475 aaKnown RBP15.8■□□□□ 0.12
SUMO1-208ENST00000409627 ANGPTL2Q9UKU9 493 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 FIS1Q9Y3D6 152 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 DNAJC15Q9Y5T4 150 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 CACNA1AO00555 2505 aa15.8■□□□□ 0.12
SUMO1-208ENST00000409627 C4orf51C9J302 202 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 FOXS1O43638 330 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 SEMA3DO95025 777 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 ETHE1O95571 254 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF888P0CJ79 500 aaPredicted RBP15.79■□□□□ 0.12
SUMO1-208ENST00000409627 ALOX12P18054 663 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 SNRPNP63162 240 aaKnown RBP15.79■□□□□ 0.12
SUMO1-208ENST00000409627 TGM3Q08188 693 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 ZNF385CQ66K41 422 aaPredicted RBP15.79■□□□□ 0.12
SUMO1-208ENST00000409627 PRMT9Q6P2P2 845 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 TRIM40Q6P9F5 258 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 TRIM46Q7Z4K8 759 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 DSELQ8IZU8 1212 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 TWIST2Q8WVJ9 160 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 FAR2Q96K12 515 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 F2RL3Q96RI0 385 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 HBEGFQ99075 208 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 DPH2Q9BQC3 489 aaPredicted RBP15.79■□□□□ 0.12
SUMO1-208ENST00000409627 OR51B5Q9H339 312 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 ANKHQ9HCJ1 492 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 NMRK1Q9NWW6 199 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 FAM53CQ9NYF3 392 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 CDC14AQ9UNH5 594 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 SPTBN2O15020 2390 aa15.79■□□□□ 0.12
SUMO1-208ENST00000409627 MED19A0JLT2 244 aaPredicted RBP15.78■□□□□ 0.12
SUMO1-208ENST00000409627 H0YIG0 161 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 STMND1H3BQB6 276 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 ERI3O43414 337 aaKnown RBP15.78■□□□□ 0.12
SUMO1-208ENST00000409627 NSA2O95478 260 aaKnown RBP15.78■□□□□ 0.12
SUMO1-208ENST00000409627 IL1RNP18510 177 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 ALAS2P22557 587 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 MDH1P40925 334 aaKnown RBP15.78■□□□□ 0.12
SUMO1-208ENST00000409627 TSFMP43897 325 aaKnown RBP15.78■□□□□ 0.12
SUMO1-208ENST00000409627 RAB8AP61006 207 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 SKP1P63208 163 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 TBC1D25Q3MII6 688 aa15.78■□□□□ 0.12
SUMO1-208ENST00000409627 ABHD17CQ6PCB6 329 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms