RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 FAAH2Q6GMR7 532 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 SULT1C3Q6IMI6 304 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 SYT10Q6XYQ8 523 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 PDSS2Q86YH6 399 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 C7orf57Q8NEG2 295 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 BRIX1Q8TDN6 353 aaKnown RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 ANKRD49Q8WVL7 239 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 CNDP1Q96KN2 507 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 UBXN10Q96LJ8 280 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 LPAR4Q99677 370 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 MACROD1Q9BQ69 325 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 SLC6A16Q9GZN6 736 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 ABI3Q9P2A4 366 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 PTGFRNQ9P2B2 879 aa13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 MTO1Q9Y2Z2 717 aaKnown RBP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
NIF3L1-205ENST00000409588 DOCK10Q96BY6 2186 aa13.71□□□□□ -0.22
NIF3L1-205ENST00000409588 SPENQ96T58 3664 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 ESPL1Q14674 2120 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 FFAR3O14843 346 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 GPR42O15529 346 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 SERPIND1P05546 499 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 CRABP2P29373 138 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 MAGEA4P43358 317 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 RAB10P61026 200 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 REEP5Q00765 189 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 LAPTM5Q13571 262 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 RBBP5Q15291 538 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 NR6A1Q15406 480 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 TSNQ15631 228 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 PRR30Q53SZ7 412 aaPredicted RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 FAM180AQ6UWF9 173 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 TMIGD1Q6UXZ0 262 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 PRSS41Q7RTY9 318 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 ANKRD37Q7Z713 158 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 GPSM1Q86YR5 675 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 LGI4Q8N135 537 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 BCORP1Q8N888 145 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 OR1N1Q8NGS0 311 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 ZCCHC10Q8TBK6 192 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 STAG3L4Q8TBR4 150 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 UTP15Q8TED0 518 aaKnown RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 KIAA1191Q96A73 305 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 NPLQ9BXD5 320 aaPredicted RBP13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 MMP25Q9NPA2 562 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 SMYD2Q9NRG4 433 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 HCN3Q9P1Z3 774 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 IKZF3Q9UKT9 509 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 SLC5A6Q9Y289 635 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
NIF3L1-205ENST00000409588 NPEPPSL1A6NEC2 478 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CLGNO14967 610 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CHST10O43529 356 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 PRMT3O60678 531 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 RDH16O75452 317 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 STK16O75716 305 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 WDR47O94967 919 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CRYABP02511 175 aaKnown RBP13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CD1DP15813 335 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 PGGT1BP53609 377 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 RHAGQ02094 409 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 ABRAXAS2Q15018 415 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 DEFB134Q4QY38 66 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 SLCO4C1Q6ZQN7 724 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 QSOX2Q6ZRP7 698 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CTAGE3PQ8IX95 158 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 SIRT6Q8N6T7 355 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 HORMAD2Q8N7B1 307 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 ANKRD53Q8N9V6 530 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 GRHL3Q8TE85 626 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 PEX11GQ96HA9 241 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 FAR2Q96K12 515 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 TSNARE1Q96NA8 513 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 NMRAL1Q9HBL8 299 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 LANCL2Q9NS86 450 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 SHANK1Q9Y566 2161 aa13.69□□□□□ -0.22
NIF3L1-205ENST00000409588 CNTRLQ7Z7A1 2325 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 OR5H15A6NDH6 313 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 ANKDD1BA6NHY2 528 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CXorf49A8MYA2 514 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 PSMD12O00232 456 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 JRKO75564 520 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 CLEC3AO75596 197 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 STATHP02808 62 aa13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 S100BP04271 92 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 ZNF888P0CJ79 500 aaPredicted RBP13.68□□□□□ -0.22
NIF3L1-205ENST00000409588 ITGAMP11215 1152 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms