RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZGLP1P0C6A0 271 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 ZNF888P0CJ79 500 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 HPDP32754 393 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 PRKAA2P54646 552 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 ZNF844Q08AG5 666 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 CCDC153Q494R4 210 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 DEFB134Q4QY38 66 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 ADNP2Q6IQ32 1131 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 RAB43Q86YS6 212 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 MYLK4Q86YV6 388 aaPredicted RBP18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 L3MBTL4Q8NA19 623 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 OR7G3Q8NG95 312 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 CCT6BQ92526 530 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 NACC2Q96BF6 587 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 MIEF2Q96C03 454 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 NSUN5Q96P11 429 aaKnown RBP18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 KLHL31Q9H511 634 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 ATRXP46100 2492 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 OR7A17O14581 309 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 PLIN3O60664 434 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 CLDN9O95484 217 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 TBX6O95947 436 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 PROCP04070 461 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 SERPINB1P30740 379 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 CCNG1P51959 295 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 MAT1AQ00266 395 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 ADPRMQ3LIE5 342 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 KRT71Q3SY84 523 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 VWA2Q5GFL6 755 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 TMEM151BQ8IW70 566 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 ZNF483Q8TF39 744 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 APOBEC4Q8WW27 367 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 ATP6V1E2Q96A05 226 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 IP6K3Q96PC2 410 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 UBL7Q96S82 380 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 NTMT1Q9BV86 223 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 YIPF2Q9BWQ6 316 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 AICDAQ9GZX7 198 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 SOX17Q9H6I2 414 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 ZBTB26Q9HCK0 441 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 RRAGDQ9NQL2 400 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 C14orf105Q9NVL8 296 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 ADGRE2Q9UHX3 823 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 PCDHGA11Q9Y5H2 935 aa18.8■□□□□ 0.6
PDLIM2-207ENST00000409417 H0YIV9 168 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 FFAR3O14843 346 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 GPR42O15529 346 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 RDH16O75452 317 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SMIM10L1P0DMW3 83 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 IMPDH1P20839 514 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 MMP11P24347 488 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 HNRNPH1P31943 449 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 OTX2P32243 289 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 RAB8AP61006 207 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 KLC1Q07866 573 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SYT16Q17RD7 645 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 TOR1AIP1Q5JTV8 583 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SHISA6Q6ZSJ9 500 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SRRM1Q8IYB3 904 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 BANPQ8N9N5 519 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 OR51Q1Q8NH59 317 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 RDH11Q8TC12 318 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 ZNF473Q8WTR7 871 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 GAL3ST3Q96A11 431 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 REPS1Q96D71 796 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 MS4A6EQ96DS6 147 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 CCDC126Q96EE4 140 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 WBP1Q96G27 269 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SMIM10Q96HG1 83 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 CLK4Q9HAZ1 481 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 SEMA4BQ9NPR2 832 aaPredicted RBP18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 MKS1Q9NXB0 559 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 MAN2B2Q9Y2E5 1009 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 RNF11Q9Y3C5 154 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 TSC22D4Q9Y3Q8 395 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 KCNMB2Q9Y691 235 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 CCDC88CQ9P219 2028 aa18.79■□□□□ 0.6
PDLIM2-207ENST00000409417 G3V2L1 256 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 MYL2P10916 166 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 PCNAP12004 261 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 PIK3CBP42338 1070 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 CCR10P46092 362 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 TRAF3Q13114 568 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 CPSF6Q16630 551 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 LINC00303Q3SY05 128 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 ZNF678Q5SXM1 525 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 BEND6Q5SZJ8 279 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 ZYG11AQ6WRX3 759 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 MRGPREQ86SM8 312 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 ZC3H7AQ8IWR0 971 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 PRSS58Q8IYP2 241 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 PPP4R1Q8TF05 950 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 APOPT1Q96IL0 206 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 TMEM237Q96Q45 408 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 REXO4Q9GZR2 422 aaKnown RBP18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 SEMA3GQ9NS98 782 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 HCN3Q9P1Z3 774 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 C3orf18Q9UK00 162 aa18.78■□□□□ 0.6
PDLIM2-207ENST00000409417 PLLPQ9Y342 182 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms