RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 STRA6Q9BX79 667 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 C1QTNF7Q9BXJ2 289 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 RSPH9Q9H1X1 276 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 PPA2Q9H2U2 334 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 NARFLQ9H6Q4 476 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 KAT8Q9H7Z6 458 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 PRDM8Q9NQV8 689 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TM7SF3Q9NS93 570 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 MRPL39Q9NYK5 338 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 ACTR3BQ9P1U1 418 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 KIF17Q9P2E2 1029 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ZNF639Q9UID6 485 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TEKT2Q9UIF3 430 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 KCNE5Q9UJ90 142 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 EMCNQ9ULC0 261 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 SLC39A10Q9ULF5 831 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 PEX16Q9Y5Y5 336 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 PIEZO2Q9H5I5 2752 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CROCCQ5TZA2 2017 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ABCA12Q86UK0 2595 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TCRBV7S3A2A0A539 114 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 PABPN1LA6NDY0 278 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 TMEM191CA6NGB0 347 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CLDN24A6NM45 220 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 AHRRA9YTQ3 701 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ATP6V1G2-DDX39BF2Z307 99 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 K7ENM7 598 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 NCAM2O15394 837 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 EDIL3O43854 480 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CST8O60676 142 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ZNF780AO75290 641 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 WDPCPO95876 746 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ASNSP08243 561 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 THRBP10828 461 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 DBTP11182 482 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 MLNP12872 115 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GLULP15104 373 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ITGALP20701 1170 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CD9P21926 228 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TYK2P29597 1187 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 RFC2P35250 354 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 DPP6P42658 865 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CPT1AP50416 773 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ALDH3A2P51648 485 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 KPNA2P52292 529 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 ATXN3P54252 364 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 LILRA4P59901 499 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ACTR2P61160 394 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 INCA1Q0VD86 236 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 SEMA3BQ13214 749 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GNA13Q14344 377 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 STK11Q15831 433 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 RFX4Q33E94 735 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GLRA4Q5JXX5 417 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 SPANXN2Q5MJ10 180 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GRTP1Q5TC63 336 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GARNL3Q5VVW2 1013 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 LIPMQ5VYY2 423 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 MFSD14CQ5VZR4 134 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 PAGE2Q7Z2X7 111 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ANKRD33Q7Z3H0 272 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TMPRSS9Q7Z410 1059 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 SAMD14Q8IZD0 417 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 OFCC1Q8IZS5 231 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TCTE3Q8IZS6 198 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ABRAQ8N0Z2 381 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CLEC4FQ8N1N0 589 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 NKAPQ8N5F7 415 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 RNF148Q8N7C7 305 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 PAPD5Q8NDF8 572 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 KBTBD8Q8NFY9 601 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 TTLQ8NG68 377 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CPT1CQ8TCG5 803 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CANT1Q8WVQ1 401 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 FCGR1BQ92637 280 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ZHX1-C8orf76Q96EF9 292 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 IL12RB2Q99665 862 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 CPNE1Q99829 537 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 EIF2AK1Q9BQI3 630 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 TEX101Q9BY14 249 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 NUAK2Q9H093 628 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 OR51B5Q9H339 312 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 SMOC2Q9H3U7 446 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ST6GALNAC4Q9H4F1 302 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 HEYLQ9NQ87 328 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 TAS2R7Q9NYW3 318 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 GLTPQ9NZD2 209 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 EIF3KQ9UBQ5 218 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 CPSF3Q9UKF6 684 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 PACSIN3Q9UKS6 424 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 AURKCQ9UQB9 309 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 ZNF175Q9Y473 711 aa5.28□□□□□ -1.56
CLK1-202ENST00000409403 MTF2Q9Y483 593 aaPredicted RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 COPG1Q9Y678 874 aaKnown RBP5.28□□□□□ -1.56
CLK1-202ENST00000409403 TANC1Q9C0D5 1861 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 A0A1W2PRG6 482 aa5.27□□□□□ -1.57
CLK1-202ENST00000409403 TYW5A2RUC4 315 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms