RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TECPR1Q7Z6L1 1165 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 GPR180Q86V85 440 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 TRIM69Q86WT6 500 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 GATAD2AQ86YP4 633 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 RASGRP3Q8IV61 690 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 EID3Q8N140 333 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 BEND7Q8N7W2 519 aaPredicted RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 DCBLD1Q8N8Z6 715 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 FAM181AQ8N9Y4 354 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 FBXO15Q8NCQ5 510 aaPredicted RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 VPS37AQ8NEZ2 397 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 TSPAN14Q8NG11 270 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 NCSTNQ92542 709 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 KLK6Q92876 244 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 FGF11Q92914 225 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PPM1MQ96MI6 270 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 RNF145Q96MT1 663 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PRPF18Q99633 342 aaKnown RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CHID1Q9BWS9 393 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC17A9Q9BYT1 436 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ACTL8Q9H568 366 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 TM9SF3Q9HD45 589 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 INTS7Q9NVH2 962 aaKnown RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SMPD3Q9NY59 655 aaPredicted RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 UBAP1Q9NZ09 502 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ZNHIT2Q9UHR6 403 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 CORO2BQ9UQ03 480 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 PCDHGA11Q9Y5H2 935 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 SPTA1P02549 2419 aa12.42□□□□□ -0.42
SMARCB1-203ENST00000407082 C7orf72A4D263 438 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 H3BNH8 94 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 LDOC1O95751 146 aaPredicted RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ALBP02768 609 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 IGHV4-34P06331 123 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 RPL3P39023 403 aaKnown RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 RXRGP48443 463 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 C21orf58P58505 322 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 PHEXP78562 749 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 MYBPC1Q00872 1141 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 HMGCS1Q01581 520 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ABHD18Q0P651 414 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 CHIT1Q13231 466 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 HIST2H2ACQ16777 129 aaPredicted RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 CNPY1Q3B7I2 92 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 HES3Q5TGS1 186 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 HIST2H2AA3Q6FI13 130 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 TTC33Q6PID6 262 aaPredicted RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 Q6ZVL8 140 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 DET1Q7L5Y6 550 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 HSD11B1LQ7Z5J1 315 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 MICU2Q8IYU8 434 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 CBR4Q8N4T8 237 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ZFP28Q8NHY6 868 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 C1orf216Q8TAB5 229 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 PNPT1Q8TCS8 783 aaKnown RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 NAT14Q8WUY8 206 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 FAM162AQ96A26 154 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 AP2M1Q96CW1 435 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 FAM120BQ96EK7 910 aaKnown RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC29A1Q99808 456 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ADI1Q9BV57 179 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 RIOK2Q9BVS4 552 aaKnown RBP12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ACPTQ9BZG2 426 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 ABCG8Q9H221 673 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 OLAHQ9NV23 265 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 COQ6Q9Y2Z9 468 aa12.41□□□□□ -0.42
SMARCB1-203ENST00000407082 KCNE1BA0A087WTH5 132 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 C10orf142B7Z368 130 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 H0YIV9 168 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 SOCS2O14508 198 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 SLC31A1O15431 190 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 LATO43561 262 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 RFPL3O75679 317 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 BMP10O95393 424 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 PAK4O96013 591 aaPredicted RBP12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 MTHFD1P11586 935 aaKnown RBP12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 C6P13671 934 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 ZNF23P17027 643 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 CKMT2P17540 419 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 AMD1P17707 334 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 DDX5P17844 614 aaKnown RBP12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 GSTT1P30711 240 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 CAPGP40121 348 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 DGKQP52824 942 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 C21orf59P57076 290 aa12.4□□□□□ -0.42
SMARCB1-203ENST00000407082 OR4D2P58180 307 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms