RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DFNA5O60443 496 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 SH3BGRLO75368 114 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 TACR1P25103 407 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 HPCAL1P37235 193 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 NOVA1P51513 510 aaKnown RBP20.08■□□□□ 0.8
TPM1-208ENST00000404484 MTTPP55157 894 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 RPS15AP62244 130 aaKnown RBP20.08■□□□□ 0.8
TPM1-208ENST00000404484 RAE1P78406 368 aaKnown RBP20.08■□□□□ 0.8
TPM1-208ENST00000404484 ZNF763Q0D2J5 394 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 RIPK1Q13546 671 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 FAM174BQ3ZCQ3 159 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 TMEM35AQ53FP2 167 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 DNAJB8Q8NHS0 232 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 SLC13A3Q8WWT9 602 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 CDRT15Q96T59 188 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 MAP10Q9P2G4 905 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 SLC7A8Q9UHI5 535 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 MCM8Q9UJA3 840 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 PCDHGB2Q9Y5G2 931 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 PCDHGA7Q9Y5G6 932 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 KLK4Q9Y5K2 254 aa20.08■□□□□ 0.8
TPM1-208ENST00000404484 C15orf38-AP3S2A0A0A6YYH1 394 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 HAT1O14929 419 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 TNFSF14O43557 240 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 PGRP06401 933 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 CEACAM1P13688 526 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 S100A3P33764 101 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 RPL3P39023 403 aaKnown RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 GRIA3P42263 894 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 ARRB1P49407 418 aaPredicted RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 CYP4F2P78329 520 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 SRSF11Q05519 484 aaKnown RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 C8orf82Q6P1X6 216 aaPredicted RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 OGFOD3Q6PK18 319 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 SPESP1Q6UW49 350 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 ARPINQ7Z6K5 226 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 PAQR7Q86WK9 346 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 C17orf82Q86X59 251 aaPredicted RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 RIMKLAQ8IXN7 391 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 ARL14Q8N4G2 192 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 KRTCAP2Q8N6L1 136 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 MFSD9Q8NBP5 474 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 FLVCR1-AS1Q8TAF5 88 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 LRRC58Q96CX6 371 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 SLC45A3Q96JT2 553 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 CLPTM1LQ96KA5 538 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 TMEM74Q96NL1 305 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 PRPF18Q99633 342 aaKnown RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 RMND5AQ9H871 391 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 HRASLS2Q9NWW9 162 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 WBP11Q9Y2W2 641 aaKnown RBP20.07■□□□□ 0.8
TPM1-208ENST00000404484 AP1M2Q9Y6Q5 423 aa20.07■□□□□ 0.8
TPM1-208ENST00000404484 ASPDHA6ND91 283 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 OR5K3A6NET4 321 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 LILRA5A6NI73 299 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 NDUFS4O43181 175 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 PCDHGA12O60330 932 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 BCL6P41182 706 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 RXRGP48443 463 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 CCT8P50990 548 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 ARFIP1P53367 373 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 RELAQ04206 551 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 MAPKAPK3Q16644 382 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 SPANXN4Q5MJ08 99 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 FAM20CQ8IXL6 584 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 ZUFSPQ96AP4 578 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 RGMAQ96B86 450 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 THAP11Q96EK4 314 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 RASSF4Q9H2L5 321 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 ADA2Q9NZK5 511 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 ADAM29Q9UKF5 820 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 PCDHGA4Q9Y5G9 962 aa20.06■□□□□ 0.8
TPM1-208ENST00000404484 A0A0J9YY10 115 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 OR2A25A4D2G3 310 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 LCMT2O60294 686 aaKnown RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 NOBOXO60393 691 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 GSTM5P46439 218 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 DGKQP52824 942 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 MAZP56270 477 aaKnown RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 BNIP3Q12983 259 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 SUZ12Q15022 739 aaKnown RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 SPATS1Q496A3 300 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 PIGGQ5H8A4 983 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 SAMD4BQ5PRF9 694 aaKnown RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 C1orf146Q5VVC0 180 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 IKBIPQ70UQ0 350 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 NAXDQ8IW45 347 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 SFTPA2Q8IWL1 248 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 CREB3L4Q8TEY5 395 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 OR52E6Q96RD3 313 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 GPATCH1Q9BRR8 931 aaKnown RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 DENND2DQ9H6A0 471 aaPredicted RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 BTBD3Q9Y2F9 522 aa20.05■□□□□ 0.8
TPM1-208ENST00000404484 ARID1BQ8NFD5 2236 aaPredicted RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 TP53BP1Q12888 1972 aaPredicted RBP20.05■□□□□ 0.8
TPM1-208ENST00000404484 MED19A0JLT2 244 aaPredicted RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 ARHGAP10A1A4S6 786 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SAP18O00422 153 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 CBFA2T3O75081 653 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 KCNH1O95259 989 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms