RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ABCB1P08183 1280 aaPredicted RBP19.08■□□□□ 0.65
CCDC47-202ENST00000403162 DBTP11182 482 aaKnown RBP19.08■□□□□ 0.65
CCDC47-202ENST00000403162 LAMP1P11279 417 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 PCYT1AP49585 367 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 AP1S2P56377 157 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 HSPA14Q0VDF9 509 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 DUSP6Q16828 381 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 ATP13A5Q4VNC0 1218 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 LIPJQ5W064 366 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 CRTC1Q6UUV9 634 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 Q6ZPB1 254 aaPredicted RBP19.08■□□□□ 0.65
CCDC47-202ENST00000403162 RTL10Q7L3V2 364 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 TSEN54Q7Z6J9 526 aaKnown RBP19.08■□□□□ 0.65
CCDC47-202ENST00000403162 TMEM150AQ86TG1 271 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 CCDC103Q8IW40 242 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 ZNF675Q8TD23 568 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 CHAC2Q8WUX2 184 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 MRPL38Q96DV4 380 aaKnown RBP19.08■□□□□ 0.65
CCDC47-202ENST00000403162 FEVQ99581 238 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 DUSP26Q9BV47 211 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 IL21Q9HBE4 155 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 DPP7Q9UHL4 492 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 BTNL2Q9UIR0 455 aa19.08■□□□□ 0.65
CCDC47-202ENST00000403162 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 SNPHO15079 494 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 SCAMP2O15127 329 aaKnown RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 ADAMDEC1O15204 470 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 CYP2A7P20853 494 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 ITPKAP23677 461 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 GABRR2P28476 465 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 S100A5P33763 92 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 MLLT1Q03111 559 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF362Q5T0B9 420 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 C1QTNF12Q5T7M4 302 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 SKA2Q8WVK7 121 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 SH3KBP1Q96B97 665 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 C11orf24Q96F05 449 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 METTL2AQ96IZ6 378 aaKnown RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 COL21A1Q96P44 957 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 P2RY13Q9BPV8 354 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 SPATA6Q9NWH7 488 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-202ENST00000403162 HCFC1R1Q9NWW0 138 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 POU2F3Q9UKI9 436 aa19.08■□□□□ 0.64
CCDC47-202ENST00000403162 TNFRSF11BO00300 401 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 DLGAP3O95886 979 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 NUDT7P0C024 238 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 PTX3P26022 381 aaPredicted RBP19.07■□□□□ 0.64
CCDC47-202ENST00000403162 SERPINA4P29622 427 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 GRK5P34947 590 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 SEPHS1P49903 392 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 KRR1Q13601 381 aaKnown RBP19.07■□□□□ 0.64
CCDC47-202ENST00000403162 RGNQ15493 299 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 HKDC1Q2TB90 917 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 TPRG1Q6ZUI0 275 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 TMC8Q8IU68 726 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 VRK3Q8IV63 474 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 PARP16Q8N5Y8 322 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 FAM83FQ8NEG4 500 aaPredicted RBP19.07■□□□□ 0.64
CCDC47-202ENST00000403162 WDR20Q8TBZ3 569 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF576Q9H609 170 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 ASAH2Q9NR71 780 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 CDH23Q9H251 3354 aa19.07■□□□□ 0.64
CCDC47-202ENST00000403162 ATG2AQ2TAZ0 1938 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 HAT1O14929 419 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 IGSF6O95976 241 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ADORA3P0DMS8 318 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 PFN3P60673 137 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 TEAD4Q15561 434 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 PLEKHS1Q5SXH7 462 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 CAMKMTQ7Z624 323 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 DENND6BQ8NEG7 585 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 IGFLR1Q9H665 355 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 TMEM184CQ9NVA4 438 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 NDUFAF4Q9P032 175 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 BTBD3Q9Y2F9 522 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 POFUT2Q9Y2G5 429 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 PCDHGA2Q9Y5H1 932 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 GREM1O60565 184 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF821O75541 412 aaPredicted RBP19.06■□□□□ 0.64
CCDC47-202ENST00000403162 HNRNPA1P09651 372 aaKnown RBP eCLIP19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ANXA8P13928 327 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 GABRB1P18505 474 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 CD22P20273 847 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 SELENOWP63302 87 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 IRF8Q02556 426 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ACSM2AQ08AH3 577 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 EIF4HQ15056 248 aaKnown RBP19.06■□□□□ 0.64
CCDC47-202ENST00000403162 LRIT3Q3SXY7 679 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ACSM2BQ68CK6 577 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 LRRC66Q68CR7 880 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 GAREM2Q75VX8 874 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 DEPDC4Q8N2C3 294 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF513Q8N8E2 541 aaPredicted RBP19.06■□□□□ 0.64
CCDC47-202ENST00000403162 C11orf65Q8NCR3 313 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 OR10G2Q8NGC3 310 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 OR4C15Q8NGM1 316 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 KLHL3Q9UH77 587 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 MAPRE3Q9UPY8 281 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 ZNF451Q9Y4E5 1061 aa19.06■□□□□ 0.64
CCDC47-202ENST00000403162 PEX16Q9Y5Y5 336 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms