RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ARRDC2Q8TBH0 407 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 HRASLS5Q96KN8 279 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 NIPSNAP1Q9BPW8 284 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 POLR1EQ9GZS1 481 aaKnown RBP16.46■□□□□ 0.23
PTPRA-205ENST00000399903 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 RPS6KA6Q9UK32 745 aa16.46■□□□□ 0.23
PTPRA-205ENST00000399903 A0A0D9SEW6 157 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 FFAR2O15552 330 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GANABQ14697 944 aaKnown RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 FBXO43Q4G163 708 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 ARTNQ5T4W7 220 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 LIPKQ5VXJ0 399 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 PTCHD4Q6ZW05 846 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 VN1R5Q7Z5H4 357 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 MON1AQ86VX9 555 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 BCL7CQ8WUZ0 217 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SELENOMQ8WWX9 145 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SERPINB11Q96P15 392 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 RHCGQ9UBD6 479 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 CLEC2DQ9UHP7 191 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 CMAHPQ9Y471 501 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 PCDHB7Q9Y5E2 793 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 V9GYH0 126 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GOLGA4Q13439 2230 aaKnown RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 FPGTO14772 594 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 HOXB8P17481 243 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 POLR2CP19387 275 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 TYMPP19971 482 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GGT2P36268 569 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 CCT3P49368 545 aaKnown RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GZMKP49863 264 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GPNMBQ14956 572 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SF1Q15637 639 aaKnown RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF284Q2VY69 593 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 PTRHD1Q6GMV3 140 aaKnown RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 MSANTD2Q6P1R3 559 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 ZZZ3Q8IYH5 903 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 CD200R1Q8TD46 325 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF556Q9HAH1 456 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GALNT9Q9HCQ5 603 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 LRFN2Q9ULH4 789 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 PCDHGC4Q9Y5F7 938 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 RAMP2O60895 175 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 OR1E1P30953 314 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 MAN2A2P49641 1150 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SUOXP51687 545 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
PTPRA-205ENST00000399903 WSCD2Q2TBF2 565 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 IDO2Q6ZQW0 420 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 ATP6V1C2Q8NEY4 427 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SETD6Q8TBK2 473 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 SRRQ9GZT4 340 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 GLTPQ9NZD2 209 aa16.45■□□□□ 0.22
PTPRA-205ENST00000399903 APOL3O95236 402 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 PEX11BO96011 259 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 CSF3P09919 207 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 OGNP20774 298 aaKnown RBP16.44■□□□□ 0.22
PTPRA-205ENST00000399903 DOC2BQ14184 412 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 GPR19Q15760 415 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 VMACQ2NL98 169 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF57Q68EA5 555 aaPredicted RBP16.44■□□□□ 0.22
PTPRA-205ENST00000399903 TMC8Q8IU68 726 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 PHC2Q8IXK0 858 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 CLECL1Q8IZS7 167 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 CLDN19Q8N6F1 224 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 OR6C4Q8NGE1 309 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 UROC1Q96N76 676 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 CLMPQ9H6B4 373 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 GKN1Q9NS71 199 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 GRXCR2A6NFK2 248 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 OAZ2O95190 189 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 TSPAN12O95859 305 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 FGF1P05230 155 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 ADRA2AP08913 450 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 SDHBP21912 280 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 PSMA1P25786 263 aaKnown RBP16.44■□□□□ 0.22
PTPRA-205ENST00000399903 APEX1P27695 318 aaKnown RBP16.44■□□□□ 0.22
PTPRA-205ENST00000399903 SSX1Q16384 188 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 LHX8Q68G74 356 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 KLHDC8BQ8IXV7 354 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 SLC7A5P2Q9GIP4 190 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 ATP13A1Q9HD20 1204 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 DNAJC27Q9NZQ0 273 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 LOC102723532A0A0G2JNH3 316 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 LRRTM2O43300 516 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 SUV39H1O43463 412 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 PDGFAP04085 211 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 MAD2L1Q13257 205 aaPredicted RBP16.44■□□□□ 0.22
PTPRA-205ENST00000399903 LGI4Q8N135 537 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 FBXL6Q8N531 539 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 POPDC3Q9HBV1 291 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 FKBP14Q9NWM8 211 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
PTPRA-205ENST00000399903 MTMR11A4FU01 709 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 C2orf81A6NN90 581 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 ATP6V1G2-DDX39BF2Z307 99 aa16.43■□□□□ 0.22
PTPRA-205ENST00000399903 GJB5O95377 273 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms