RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM110BQ8TC76 370 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 HSH2DQ96JZ2 352 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 MVB12BQ9H7P6 319 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 SMURF2Q9HAU4 748 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 HRASLS2Q9NWW9 162 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 MARK1Q9P0L2 795 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 THAP10Q9P2Z0 257 aaPredicted RBP13.5□□□□□ -0.25
SCAF4-202ENST00000399804 PCDHGB3Q9Y5G1 929 aa13.5□□□□□ -0.25
SCAF4-202ENST00000399804 NUDT14O95848 222 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 BCHEP06276 602 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ASGR2P07307 311 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TACR1P25103 407 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 KDELR2P33947 212 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CBLBQ13191 982 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CCSMST1Q4G0I0 132 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TYW3Q6IPR3 259 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 SPRED2Q7Z698 418 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 GALNT10Q86SR1 603 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 APOOQ9BUR5 198 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 KLHL33A6NCF5 533 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 RGS8P57771 180 aaPredicted RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 EIF2B5Q13144 721 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 IRF4Q15306 451 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 WSCD2Q2TBF2 565 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 MINDY4Q4G0A6 757 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 DCST1Q5T197 706 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 PDZD3Q86UT5 571 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 PELI3Q8N2H9 469 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 DTWD1Q8N5C7 304 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 FAM3CQ92520 227 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 EID2BQ96D98 161 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CD320Q9NPF0 282 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 PRDM8Q9NQV8 689 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TEKT2Q9UIF3 430 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 RGS5O15539 181 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 GADD45GO95257 159 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 DRD1P21728 446 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ARMCX6Q7L4S7 300 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 AMIGO1Q86WK6 493 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM126BQ8IUX1 230 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CAMKVQ8NCB2 501 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TPSD1Q9BZJ3 242 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 SOX17Q9H6I2 414 aaPredicted RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CLN6Q9NWW5 311 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ACSL6Q9UKU0 697 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 A0A1B0GTL3 188 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TSPAN12O95859 305 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 IMPA1P29218 277 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 COPZ1P61923 177 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 LASP1Q14847 261 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 NDUFA9Q16795 377 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TMEM31Q5JXX7 168 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 PTCHD4Q6ZW05 846 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 TMCO5AQ8N6Q1 288 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CAMK1GQ96NX5 476 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 NEUROD4Q9HD90 331 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
SCAF4-202ENST00000399804 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 CD207Q9UJ71 328 aa13.49□□□□□ -0.25
SCAF4-202ENST00000399804 ATG2BQ96BY7 2078 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 TDRD15B5MCY1 1934 aaKnown RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SEMA4FO95754 770 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SERPINB1P30740 379 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 RPS6KA3P51812 740 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 TLR1Q15399 786 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 HCAR2Q8TDS4 363 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 FBXL20Q96IG2 436 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 MAP10Q9P2G4 905 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 LYVE1Q9Y5Y7 322 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 TRBC2A0A5B9 178 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF860A6NHJ4 632 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CLDN4O14493 209 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CRISP3P54108 245 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 ARSFP54793 590 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SMU1Q2TAY7 513 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 FBXO43Q4G163 708 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 FAM219BQ5XKK7 198 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 ZNF765Q7L2R6 523 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 ARHGAP22Q7Z5H3 698 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CCDC116Q8IYX3 515 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SAMD14Q8IZD0 417 aaPredicted RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 RASSF5Q8WWW0 418 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 TEX37Q96LM6 180 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 PAIP1Q9H074 479 aaKnown RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CA14Q9ULX7 337 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 DNAJA1P31689 397 aaKnown RBP13.48□□□□□ -0.25
SCAF4-202ENST00000399804 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 PLEKHM3Q6ZWE6 761 aa13.48□□□□□ -0.25
SCAF4-202ENST00000399804 EGFL6Q8IUX8 553 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms