RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TNFRSF8P28908 595 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EMP2P54851 167 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IRF8Q02556 426 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ASB18Q6ZVZ8 466 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 VN1R5Q7Z5H4 357 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 KRT78Q8N1N4 520 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GALNT16Q8N428 558 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 AMER2Q8N7J2 671 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CCT6BQ92526 530 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PTCD3Q96EY7 689 aaKnown RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 C14orf105Q9NVL8 296 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 XPR1Q9UBH6 696 aa13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 V9GYY5 206 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 A0A0G2JN53 185 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 FOXO6A8MYZ6 492 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CDC123O75794 336 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 WFS1O76024 890 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IGHEP01854 428 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ALDH18A1P54886 795 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 VSNL1P62760 191 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TUBB8Q3ZCM7 444 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MINDY4Q4G0A6 757 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TOR1AIP1Q5JTV8 583 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LGSNQ5TDP6 509 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MFSD4BQ5TF39 518 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ABHD13Q7L211 337 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PRICKLE2Q7Z3G6 844 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PHF21BQ96EK2 531 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 WDR34Q96EX3 536 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PEX11GQ96HA9 241 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 VN1R1Q9GZP7 353 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GPR83Q9NYM4 423 aa13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PSMC3IPQ9P2W1 217 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCDHGA9Q9Y5G4 932 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CCDC189A1A4V9 331 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LRIT2A6NDA9 550 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 GOLGA8RI6L899 631 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RBP1P09455 135 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SBK3P0C264 359 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 COL6A2P12110 1019 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ACPPP15309 386 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EPB42P16452 691 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PGDP52209 483 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EEF1A2Q05639 463 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TBCCQ15814 346 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TSNAXIP1Q2TAA8 658 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TIFABQ6ZNK6 161 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PARP9Q8IXQ6 854 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PTGR2Q8N8N7 351 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 TTLQ8NG68 377 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MTBPQ96DY7 904 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 EFCAB11Q9BUY7 163 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 NT5DC2Q9H857 520 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 FETUBQ9UGM5 382 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ANGPTL3Q9Y5C1 460 aa13.31□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IQANK1A0A1B0GTG1 560 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 URADA6NGE7 173 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 E2F3O00716 465 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ERI3O43414 337 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SUV39H1O43463 412 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CHST10O43529 356 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SLC28A2O43868 658 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CLEC3AO75596 197 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 COX6A1P12074 109 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ITGA3P26006 1051 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 CASP2P42575 452 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 SLCO1A2P46721 670 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 Q0VFX4 171 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 E2F2Q14209 437 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PCBP2Q15366 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 LANCL3Q6ZV70 420 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 RPS27LQ71UM5 84 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MYLK4Q86YV6 388 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MS4A6EQ96DS6 147 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 MRPL57Q9BQC6 102 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 PITHD1Q9GZP4 211 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZNF552Q9H707 407 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 ZNF160Q9HCG1 818 aa13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 HEMK1Q9Y5R4 338 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB1-202ENST00000399079 IGHV3-20A0A0C4DH32 117 aa13.29□□□□□ -0.28
HLA-DQB1-202ENST00000399079 A0A1W2PPM1 405 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms