RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ERLEC1Q96DZ1 483 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MTERF1Q99551 399 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 DPEP2Q9H4A9 486 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 TPT1P8Q9HAU6 139 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ABCD2Q9UBJ2 740 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LIPT1Q9Y234 373 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 NFS1Q9Y697 457 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ERI3O43414 337 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 TYROBPO43914 113 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 INHAP05111 366 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CFL1P23528 166 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ACRV1P26436 265 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 LCN1P31025 176 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 RYKP34925 604 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PGDP52209 483 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PRKCDQ05655 676 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GALNT1Q10472 559 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC36A3Q495N2 470 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 C1orf189Q5VU69 101 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GLT8D1Q68CQ7 371 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CD99L2Q8TCZ2 262 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 DDX1Q92499 740 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PTPN18Q99952 460 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ELAC1Q9H777 363 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 KDM3BQ7LBC6 1761 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 A0A1B0GVI7 797 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 UNC119BA6NIH7 251 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 IQCF5A8MTL0 148 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 LOC730098B7Z3J9 87 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 DENRO43583 198 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CHRM1P11229 460 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 FGF3P11487 239 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 AZGP1P25311 298 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 MAGEA2P43356 314 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 IRF5Q13568 498 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CCINQ13939 588 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PLEKHG7Q6ZR37 379 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 IQCHQ86VS3 1027 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CEP97Q8IW35 865 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PM20D2Q8IYS1 436 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 MINDY1Q8N5J2 469 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 TSTD1Q8NFU3 115 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF431Q8TF32 576 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 TOR3AQ9H497 397 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 METTL8Q9H825 291 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 MARCH7Q9H992 704 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 WRAP73Q9P2S5 460 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SH3D21A4FU49 640 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CCRL2O00421 344 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GRID2O43424 1007 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 HTRA2O43464 458 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SCGNO76038 276 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 APOL3O95236 402 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PDYNP01213 254 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 AHCYP23526 432 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 EVX2Q03828 476 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CRHR2Q13324 411 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 MANEALQ5VSG8 457 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 FAM156AQ8NDB6 213 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GRHL3Q8TE85 626 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PPP1R13LQ8WUF5 828 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF471Q9BX82 626 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 MVB12BQ9H7P6 319 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CCM2LQ9NUG4 571 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PPM1HQ9ULR3 514 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ABCG2Q9UNQ0 655 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 INSL6Q9Y581 213 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CCL22O00626 93 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 RP2O75695 350 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CD1DP15813 335 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GPR143P51810 404 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 TMEM35AQ53FP2 167 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF598Q86UK7 904 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC22A16Q86VW1 577 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ARHGAP12Q8IWW6 846 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF565Q8N9K5 539 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 PLA2G15Q8NCC3 412 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CDK15Q96Q40 435 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 DOHHQ9BU89 302 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 GTPBP2Q9BX10 602 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 B3GNT4Q9C0J1 378 aa8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CARS2Q9HA77 564 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-201ENST00000399002 CDRT1O95170 752 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 G6PDP11413 515 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 DRD2P14416 443 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 DPP6P42658 865 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 POU6F2P78424 691 aaPredicted RBP8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 LRRC66Q68CR7 880 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 ENPP7Q6UWV6 458 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 SLC37A3Q8NCC5 494 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 TMEM234Q8WY98 164 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 L3HYPDHQ96EM0 354 aa8.09□□□□□ -1.12
SPTLC3-201ENST00000399002 ZFP3Q96NJ6 502 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms