RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CALHM3Q86XJ0 350 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 ADGRG2Q8IZP9 1017 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 LGI4Q8N135 537 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 TEX26Q8N6G2 289 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 FCGR1BQ92637 280 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 DIRAS2Q96HU8 199 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 COL21A1Q96P44 957 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 C1QTNF3Q9BXJ4 246 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 HSPB11Q9Y547 144 aa9.52□□□□□ -0.88
PTCHD4-202ENST00000398738 MAGEB17A8MXT2 336 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ANKRD66B4E2M5 251 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 TGFBR3LH3BV60 316 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 WNT9AO14904 365 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 STK16O75716 305 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 GBAP04062 536 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 MYL9P24844 172 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 RGS4P49798 205 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 GZMMP51124 257 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 CDC42EP1Q00587 391 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 PCBP2Q15366 365 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■□□□ 11.4
PTCHD4-202ENST00000398738 TLK2Q86UE8 772 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 NATD1Q8N6N6 113 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 GPR156Q8NFN8 814 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ENKURQ8TC29 256 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 TMCO6Q96DC7 493 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 MAP6Q96JE9 813 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 HRASLS5Q96KN8 279 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 CD244Q9BZW8 370 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ANKHQ9HCJ1 492 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 NMRK2Q9NPI5 230 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 DNAJC27Q9NZQ0 273 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A0G2JMZ2 1700 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 LRRC37A2A6NM11 1700 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 KPNA5O15131 536 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 TSPAN19P0C672 248 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 PSKH1P11801 424 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 POLR2EP19388 210 aaKnown RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 LRRC74AQ0VAA2 488 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 PPIGQ13427 754 aaKnown RBP eCLIP9.52□□□□□ -0.892e-6■■□□□ 14.1
PTCHD4-202ENST00000398738 EXOC3L2Q2M3D2 409 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 LEXMQ3ZCV2 418 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 GPAT3Q53EU6 434 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 CCDC190Q86UF4 302 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZZZ3Q8IYH5 903 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF557Q8N988 423 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 OR9Q1Q8NGQ5 310 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 NELL1Q92832 810 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 CCDC120Q96HB5 630 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 VPS35Q96QK1 796 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 MCCC1Q96RQ3 725 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 TCF25Q9BQ70 676 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 BARHL1Q9BZE3 327 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 UCK2Q9BZX2 261 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 C11orf54Q9H0W9 315 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF556Q9HAH1 456 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 OLA1Q9NTK5 396 aaKnown RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF226Q9NYT6 803 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 FZD4Q9ULV1 537 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 CFL2Q9Y281 166 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 DHRS7Q9Y394 339 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 ZFP37Q9Y6Q3 630 aaPredicted RBP9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 HSPE1-MOB4S4R3N1 261 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 PARP14Q460N5 1801 aa9.52□□□□□ -0.89
PTCHD4-202ENST00000398738 PCM1Q15154 2024 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 SCN4AP35499 1836 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 TRBV5-3A0A0A0MS03 114 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A0G2JMP0 313 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 C17orf102A2RUQ5 167 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 F5H5T6 163 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 RFXAPO00287 272 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 CDRT1O95170 752 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 CLDN9O95484 217 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PRAMEF1O95521 474 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 IGFBP1P08833 259 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 LAMP1P11279 417 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 SDHBP21912 280 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 CD52P31358 61 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 MAGEA2P43356 314 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 CHRNEQ04844 493 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 BTBD16Q32M84 506 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 DGKKQ5KSL6 1271 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 LIPKQ5VXJ0 399 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PEAR1Q5VY43 1037 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 PAQR6Q6TCH4 344 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 AMIGO1Q86WK6 493 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 LSRQ86X29 649 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 YIPF7Q8N8F6 280 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 SLC7A6Q92536 515 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 C1orf74Q96LT6 269 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 TPT1P8Q9HAU6 139 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 CRNNQ9UBG3 495 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 NYNRINQ9P2P1 1898 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 FABP12A6NFH5 140 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM25AB3EWG3 89 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM25CB3EWG5 89 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM25GB3EWG6 89 aa9.51□□□□□ -0.89
PTCHD4-202ENST00000398738 ARHGEF9O43307 516 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms