RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 FAM220BPB1ANY3 271 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 RFPL4AL1F8VTS6 287 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 HOXC11O43248 304 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SLC11A2P49281 568 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SPIN3Q5JUX0 258 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 DTX3Q8N9I9 347 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 FEM1AQ9BSK4 669 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TMEM121Q9BTD3 319 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TBC1D17Q9HA65 648 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 NCKIPSDQ9NZQ3 722 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 WNT7AO00755 349 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SYN3O14994 580 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 COCHO43405 550 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 TBX19O60806 448 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 FMO3P31513 532 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GKP32189 559 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 BMPR1AP36894 532 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 CDK8P49336 464 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 CASP9P55211 416 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 PKNOX1P55347 436 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 RBP5P82980 135 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 COL5A1-AS1Q5SY13 56 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 HMCESQ96FZ2 354 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 SMIM3Q9BZL3 60 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 QTRT2Q9H974 415 aaKnown RBP12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
CCBE1-201ENST00000398179 GLRA3O75311 464 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 UPK1BO75841 260 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TMEM200AQ86VY9 491 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 COQ8BQ96D53 544 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SLC41A2Q96JW4 573 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 IL21RQ9HBE5 538 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SMPD3Q9NY59 655 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 A0A1W2PQJ5 194 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 C3orf70A6NLC5 250 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SEC22BO75396 215 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GZMAP12544 262 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TLE3Q04726 772 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 ATP6AP1Q15904 470 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SUPT20HL1Q3ZLR7 823 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 UNC5AQ6ZN44 842 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 ACTRT2Q8TDY3 377 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GLYATL1P3A0A0U1RQE8 302 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MMP7P09237 267 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PTPN7P35236 360 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PFKPQ01813 784 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 ADGRE1Q14246 886 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SLC14A2Q15849 920 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SMTNL2Q2TAL5 461 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TOR2AQ5JU69 321 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CDYL2Q8N8U2 506 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 UBAC2Q8NBM4 344 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 NFKBIDQ8NI38 313 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 BORCS7Q96B45 105 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 RAB11FIP5Q9BXF6 653 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 UCK1Q9HA47 277 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SLC22A11Q9NSA0 550 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CDH22Q9UJ99 828 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 ABCB11O95342 1321 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 RFXAPO00287 272 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TGM5O43548 720 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MED6O75586 246 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GKN3PP0CG01 181 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 ZNF37AP17032 561 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MAP2K3P46734 347 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 LPCAT3Q6P1A2 487 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 UQCC3Q6UW78 93 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MFSD7Q6UXD7 560 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CHSY1Q86X52 802 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CSGALNACT1Q8TDX6 532 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MIB2Q96AX9 1013 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 DUS3LQ96G46 650 aaKnown RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 STRBPQ96SI9 672 aaKnown RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 FAM49AQ9H0Q0 323 aaPredicted RBP12.43□□□□□ -0.42
CCBE1-201ENST00000398179 SLAMF7Q9NQ25 335 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PTGFRNQ9P2B2 879 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TSPAN16Q9UKR8 245 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 MAN2B2Q9Y2E5 1009 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF27A3QJZ7 478 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF25A6NGN4 478 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF26H0Y7S4 382 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF4O60810 478 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 PRAMEF11O60813 436 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CDS2O95674 445 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 OLFM2O95897 454 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 CST2P09228 141 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 TSPAN8P19075 237 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 OR3A2P47893 321 aa12.43□□□□□ -0.42
CCBE1-201ENST00000398179 GIPRP48546 466 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms