RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TLCD2A6NGC4 264 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 C9JVG2 144 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 AIM2O14862 343 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 CAPN5O15484 640 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 B4GAT1O43505 415 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 C9P02748 559 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 KRT16P08779 473 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 ENGP17813 658 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 ITGAXP20702 1163 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 CDH3P22223 829 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 TPP2P29144 1249 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 OR1D5P58170 312 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 SQSTM1Q13501 440 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 NR0B2Q15466 257 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 LAIR1Q6GTX8 287 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 IRGCQ6NXR0 463 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 PAGE2Q7Z2X7 111 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 ASPGQ86U10 573 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 C19orf47Q8N9M1 422 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 OR2L5Q8NG80 312 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 OR2I1PQ8NGU4 316 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 CLHC1Q8NHS4 586 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 SLC13A3Q8WWT9 602 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 QRFPRQ96P65 431 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 ZBTB18Q99592 522 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 NPAS2Q99743 824 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 CADM1Q9BY67 442 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 MYNNQ9NPC7 610 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 SEMA5BQ9P283 1151 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 RAB23Q9ULC3 237 aa18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 WBP11Q9Y2W2 641 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 RRP15Q9Y3B9 282 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-205ENST00000397761 MN1Q10571 1320 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 ASCC3Q8N3C0 2202 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 KHNYNO15037 678 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 GSC2O15499 205 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 IL6P05231 212 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 ALDH4A1P30038 563 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 TSFMP43897 325 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 GSTM5P46439 218 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 NUDT2P50583 147 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 KCNJ2P63252 427 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 SLC25A3Q00325 362 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 DPY19L1Q2PZI1 675 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 SPRED1Q7Z699 444 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 NUDT13Q86X67 352 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 DPP10Q8N608 796 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 STARD8Q92502 1023 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 UTP4Q969X6 686 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 ROPN1LQ96C74 230 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 ZDHHC12Q96GR4 267 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 FCRL4Q96PJ5 515 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 MAP3K3Q99759 626 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 KLHL25Q9H0H3 589 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 KLHL31Q9H511 634 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 PRDM7Q9NQW5 492 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 NDE1Q9NXR1 346 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 MAP10Q9P2G4 905 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 GMEB2Q9UKD1 530 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 PCDHGB2Q9Y5G2 931 aa18.57■□□□□ 0.56
PDLIM2-205ENST00000397761 A0A0J9YVX5 310 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 GNG14A0A1W2PPG7 69 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 EME2A4GXA9 379 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CCDC154A6NI56 674 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 C4orf51C9J302 202 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 MRASO14807 208 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 ANGPT2O15123 496 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CFLARO15519 480 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 DUX1O43812 170 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 PRAMEF10O60809 474 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 KLK1P06870 262 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 NQO1P15559 274 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CD1CP29017 333 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 RAP1GDS1P52306 607 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 GFERP55789 205 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 STXBP1P61764 594 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 MXRA7P84157 204 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CFHR1Q03591 330 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 PROX2Q3B8N5 592 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 FAM174BQ3ZCQ3 159 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 TIGD2Q4W5G0 525 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 MANEAQ5SRI9 462 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 C8orf82Q6P1X6 216 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 ABHD17CQ6PCB6 329 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 WDR74Q6RFH5 385 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 DBX2Q6ZNG2 339 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 IKBIPQ70UQ0 350 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CAMKMTQ7Z624 323 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 DSELQ8IZU8 1212 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 MINDY1Q8N5J2 469 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 PCYOX1LQ8NBM8 494 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 SRFBP1Q8NEF9 429 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 NUDT8Q8WV74 236 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 CCDC74AQ96AQ1 378 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 VPS33AQ96AX1 596 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 TCTN2Q96GX1 697 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 SORBS1Q9BX66 1292 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 IRF2BPLQ9H1B7 796 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 SMOC1Q9H4F8 434 aa18.56■□□□□ 0.56
PDLIM2-205ENST00000397761 PRM3Q9NNZ6 103 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms