RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RUVBL1Q9Y265 456 aaKnown RBP20.21■□□□□ 0.83
CPNE1-204ENST00000397443 TMED5Q9Y3A6 229 aa20.21■□□□□ 0.83
CPNE1-204ENST00000397443 C4orf51C9J302 202 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 ERI3O43414 337 aaKnown RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 PCDH7O60245 1069 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 ZBTB11O95625 1053 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 ANXA4P09525 319 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 CKMT2P17540 419 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 SDC1P18827 310 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF574Q6ZN55 896 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 NAXDQ8IW45 347 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 EGLN2Q96KS0 407 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 IRF2BPLQ9H1B7 796 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 PDE7BQ9NP56 450 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 SDR39U1Q9NRG7 319 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 IRAK4Q9NWZ3 460 aa20.2■□□□□ 0.82
CPNE1-204ENST00000397443 MN1Q10571 1320 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-204ENST00000397443 NPIPB8E9PQR5 432 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 CPNE6O95741 557 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 MAPK1P28482 360 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 SNRPNP63162 240 aaKnown RBP20.19■□□□□ 0.82
CPNE1-204ENST00000397443 RGS1Q08116 209 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 SMU1Q2TAY7 513 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 UBE3DQ7Z6J8 389 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 MCATQ8IVS2 390 aaKnown RBP20.19■□□□□ 0.82
CPNE1-204ENST00000397443 METTL4Q8N3J2 472 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 KRTCAP2Q8N6L1 136 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 RCBTB1Q8NDN9 531 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 RGMAQ96B86 450 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 MS4A6EQ96DS6 147 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 BRINP2Q9C0B6 783 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 PPT2Q9UMR5 302 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 DLL1O00548 723 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 EEDO75530 441 aaKnown RBP20.19■□□□□ 0.82
CPNE1-204ENST00000397443 KIAA0754O94854 1291 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 GSTM2P28161 218 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 TIA1P31483 386 aaKnown RBP eCLIP20.19■□□□□ 0.823e-7■■■■■ 41.5
CPNE1-204ENST00000397443 ATP4BP51164 291 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 SLC14A1Q13336 389 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 TMEM71Q6P5X7 295 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 SNX32Q86XE0 403 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 CSNK1A1LQ8N752 337 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 N4BP2L2Q92802 583 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-204ENST00000397443 AHSPQ9NZD4 102 aa20.19■□□□□ 0.82
CPNE1-204ENST00000397443 NR5A2O00482 541 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 MAP3K7O43318 606 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 AKAP10O43572 662 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 SLC22A3O75751 556 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF888P0CJ79 500 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 SSR2P43308 183 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 STXBP1P61764 594 aaKnown RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 PDCD4Q53EL6 469 aaKnown RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 ZC3H12BQ5HYM0 836 aaKnown RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 DNAJC22Q8N4W6 341 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 AMER3Q8N944 861 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 CAMKVQ8NCB2 501 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 PROKR1Q8TCW9 393 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 TM4SF19Q96DZ7 209 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 C11orf24Q96F05 449 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 GFM1Q96RP9 751 aaKnown RBP20.18■□□□□ 0.82
CPNE1-204ENST00000397443 SLC6A16Q9GZN6 736 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 ACTL8Q9H568 366 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 LHX9Q9NQ69 397 aa20.18■□□□□ 0.82
CPNE1-204ENST00000397443 ARHGAP10A1A4S6 786 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 T-ENOLP0DO92 83 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 ESRRAP11474 423 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-204ENST00000397443 COX4I1P13073 169 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 BSGP35613 385 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 PWP1Q13610 501 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 KRT72Q14CN4 511 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 WASHC2DQ5SRD0 308 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 CCNYL2Q5T2Q4 361 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 FUNDC1Q8IVP5 155 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 THAP11Q96EK4 314 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 NSL1Q96IY1 281 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 ZNF717Q9BY31 904 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-204ENST00000397443 DPY30Q9C005 99 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 TAGLN3Q9UI15 199 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 SEMA3DO95025 777 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 PRPS2P11908 318 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 TGM1P22735 817 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 IL12AP29459 219 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 HSD11B2P80365 405 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 RELAQ04206 551 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 GPR19Q15760 415 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 TMEM35AQ53FP2 167 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 FAM91A1Q658Y4 838 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 OR4C11Q6IEV9 310 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 TRIM40Q6P9F5 258 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 OR2L5Q8NG80 312 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 OR8K5Q8NH50 307 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 NT5CQ8TCD5 201 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 FCRL1Q96LA6 429 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 TEFMQ96QE5 360 aaKnown RBP20.17■□□□□ 0.82
CPNE1-204ENST00000397443 ASIC5Q9NY37 505 aa20.17■□□□□ 0.82
CPNE1-204ENST00000397443 MRPS2Q9Y399 296 aaKnown RBP20.17■□□□□ 0.82
CPNE1-204ENST00000397443 ANKRD28O15084 1053 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 TPP2P29144 1249 aaPredicted RBP20.16■□□□□ 0.82
CPNE1-204ENST00000397443 BNIP1Q12981 228 aa20.16■□□□□ 0.82
CPNE1-204ENST00000397443 CYLC2Q14093 348 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms