RNA–Protein interactions for RNA: ENST00000397223.4

FOXRED2-203, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-203ENST00000397223 VMP1Q96GC9 406 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 HIST1H2AHQ96KK5 128 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 RDH12Q96NR8 316 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 MUS81Q96NY9 551 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 OR2M4Q96R27 311 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 HIST1H2AJQ99878 128 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 H2AFJQ9BTM1 129 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 TUBB1Q9H4B7 451 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 IPPKQ9H8X2 491 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 SH2B3Q9UQQ2 575 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 BTRCQ9Y297 605 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 DNAJC15Q9Y5T4 150 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 PCM1Q15154 2024 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 WDR47O94967 919 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 KCNH1O95259 989 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 HPRP00739 348 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ELK4P28324 431 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ARL1P40616 181 aaPredicted RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 SLC6A12P48065 614 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 PCYT1AP49585 367 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ALDH3A2P51648 485 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 HNRNPFP52597 415 aaKnown RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 EEFSECP57772 596 aaKnown RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 LCP2Q13094 533 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 SP140Q13342 867 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 C1orf61Q13536 156 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ANKRD13BQ86YJ7 626 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 CADM3Q8N126 398 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ZNF480Q8WV37 535 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 MED8Q96G25 268 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 C12orf66Q96MD2 445 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 OR4K3Q96R72 315 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 CSF3RQ99062 836 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 SOX17Q9H6I2 414 aaPredicted RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 IMP3Q9NV31 184 aaKnown RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 WARS2Q9UGM6 360 aaKnown RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 ENPP5Q9UJA9 477 aa16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 TP53BP1Q12888 1972 aaPredicted RBP16.45■□□□□ 0.22
FOXRED2-203ENST00000397223 SPTY2D1-AS1A0A0U1RR47 76 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 GPR89AB7ZAQ6 455 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 GPR37L1O60883 481 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 JRKO75564 520 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 STK16O75716 305 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 CATP04040 527 aaKnown RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 HOXC4P09017 264 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 GPR89BP0CG08 455 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 CRHBPP24387 322 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 HTR1BP28222 390 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 RAD23AP54725 363 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 EPS8Q12929 822 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 TRAF3Q13114 568 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 NAE1Q13564 534 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 TSTA3Q13630 321 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 AGTRAPQ6RW13 159 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 PROSER1Q86XN7 944 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 C8orf59Q8N0T1 100 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 SPARTQ8N0X7 666 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 CDYL2Q8N8U2 506 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 OR4F6Q8NGB9 312 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 C1orf216Q8TAB5 229 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 OPTCQ9UBM4 332 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 PDZK1P1A8MUH7 402 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 SLC16A5O15375 505 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 THRBP10828 461 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 MTHFD1P11586 935 aaKnown RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 TDGF1P13385 188 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 RABIFP47224 123 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 HTR6P50406 440 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 YPEL5P62699 121 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 CD300CQ08708 224 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 DMPKQ09013 629 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 TOP3AQ13472 1001 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 DAG1Q14118 895 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 SPCS2Q15005 226 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 THOC7Q6I9Y2 204 aaKnown RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 PIK3C3Q8NEB9 887 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 HPS1Q92902 700 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 FOPNLQ96NB1 174 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 SDR39U1Q9NRG7 319 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 GPR27Q9NS67 375 aa16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 DNMT3AQ9Y6K1 912 aaPredicted RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 SNRNP200O75643 2136 aaKnown RBP16.44■□□□□ 0.22
FOXRED2-203ENST00000397223 A0A1W2PR77 199 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 BCAS1O75363 584 aaPredicted RBP16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 DEAF1O75398 565 aaPredicted RBP16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 CD27P26842 260 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 SHMT2P34897 504 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 ACTR1BP42025 376 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 GSSP48637 474 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 ARSFP54793 590 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 ACTR1AP61163 376 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 LIPEQ05469 1076 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 NFYCQ13952 458 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 RPS6KA2Q15349 733 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 USP39Q53GS9 565 aaKnown RBP16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 TJAP1Q5JTD0 557 aa16.43■□□□□ 0.22
FOXRED2-203ENST00000397223 TTC23Q5W5X9 447 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms