RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 C9orf172C9J069 976 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 FCHO1O14526 889 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 UBDO15205 165 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 GLB1P16278 677 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 TYRP1P17643 537 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 RBBP5Q15291 538 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 NR6A1Q15406 480 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 TMIGD1Q6UXZ0 262 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 ZNF574Q6ZN55 896 aaPredicted RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 LARP4Q71RC2 724 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■□□□□ 9.8
SEC13-209ENST00000397117 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 TRIM46Q7Z4K8 759 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 FAM129CQ86XR2 697 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 GBP7Q8N8V2 638 aaPredicted RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 Q8N9G6 341 aaPredicted RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 OR7G3Q8NG95 312 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 ERP27Q96DN0 273 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 B3GNT4Q9C0J1 378 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 PITHD1Q9GZP4 211 aaPredicted RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 NMUR2Q9GZQ4 415 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 TMEM184CQ9NVA4 438 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 LRIT1Q9P2V4 623 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 G3BP2Q9UN86 482 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 SNX7Q9UNH6 387 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 PEX11AO75192 247 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 FKBP9O95302 570 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 UGT2B7P16662 529 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 LBPP18428 481 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 CYP4F2P78329 520 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 REEP5Q00765 189 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 CSTF3Q12996 717 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 NAA25Q14CX7 972 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 SPESP1Q6UW49 350 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 SPRED1Q7Z699 444 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 YTHDF3Q7Z739 585 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 FAM20CQ8IXL6 584 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 LAS2Q8IYD9 372 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 FITM2Q8N6M3 262 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 ZSCAN1Q8NBB4 408 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 OR2T11Q8NH01 316 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 HUS1BQ8NHY5 278 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 WDR20Q8TBZ3 569 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 PPP3R2Q96LZ3 170 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 CATSPER2Q96P56 530 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 OR2A14Q96R47 310 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 MTERF1Q99551 399 aaKnown RBP12.66□□□□□ -0.38
SEC13-209ENST00000397117 DPH7Q9BTV6 452 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 RNF215Q9Y6U7 377 aa12.66□□□□□ -0.38
SEC13-209ENST00000397117 IGKV1-8A0A0C4DH67 115 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SERTM1A2A2V5 107 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ANKDD1BA6NHY2 528 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ZW10O43264 779 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 HSD3B1P14060 373 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 HSD3B2P26439 372 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 CD82P27701 267 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ALDH4A1P30038 563 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SERPINB1P30740 379 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 EPHA4P54764 986 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 CSNK1G2P78368 415 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 HMGCS1Q01581 520 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SLC5A12Q1EHB4 618 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 AP5B1Q2VPB7 878 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 TMEM198Q66K66 360 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 Q6ZSR9 355 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SPATA19Q7Z5L4 167 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 CLNKQ7Z7G1 428 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 FNDC5Q8NAU1 212 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 RSC1A1Q92681 617 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 AHCYL2Q96HN2 611 aaKnown RBP12.65□□□□□ -0.38
SEC13-209ENST00000397117 CMKLR1Q99788 373 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ACPTQ9BZG2 426 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SLC25A18Q9H1K4 315 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SPNS1Q9H2V7 528 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SEMA6CQ9H3T2 930 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 BRF2Q9HAW0 419 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SLC6A20Q9NP91 592 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 GIMAP2Q9UG22 337 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 ADGRE2Q9UHX3 823 aa12.65□□□□□ -0.38
SEC13-209ENST00000397117 PCM1Q15154 2024 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 AGRPO00253 132 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 FOXE1O00358 373 aaPredicted RBP12.64□□□□□ -0.39
SEC13-209ENST00000397117 LSM1O15116 133 aaKnown RBP12.64□□□□□ -0.39
SEC13-209ENST00000397117 B4GAT1O43505 415 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 OR1F1O43749 312 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 SEC22BO75396 215 aa12.64□□□□□ -0.39
SEC13-209ENST00000397117 RSL1D1O76021 490 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms