RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.32
VAPB-202ENST00000395802 RPL3P39023 403 aaKnown RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 LSSP48449 732 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 KCNK10P57789 538 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 HSD11B2P80365 405 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 SPEM2Q0P670 501 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 DPY19L1Q2PZI1 675 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 ADPRMQ3LIE5 342 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 TCTE1Q5JU00 501 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 ADNP2Q6IQ32 1131 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 ABHD13Q7L211 337 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 LIX1Q8N485 282 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 OR2L5Q8NG80 312 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 C11orf24Q96F05 449 aaPredicted RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 CNDP2Q96KP4 475 aaKnown RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 MARK4Q96L34 752 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PRPF18Q99633 342 aaKnown RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 TBCDQ9BTW9 1192 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 DPY30Q9C005 99 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 LRRN3Q9H3W5 708 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 CCDC167Q9P0B6 97 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 LY6G6EA0A0G2JKS1 128 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 CTSVO60911 334 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 GUCY1B2O75343 617 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 SNRPB2P08579 225 aaKnown RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 ANXA4P09525 319 aaPredicted RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 PVRP15151 417 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PRPS1L1P21108 318 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 GPX3P22352 226 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 CPA2P48052 419 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 GFERP55789 205 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PPP1CAP62136 330 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 ZNF763Q0D2J5 394 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 AGKQ53H12 422 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 IKBIPQ70UQ0 350 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 RNF175Q8N4F7 328 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
VAPB-202ENST00000395802 GAL3ST3Q96A11 431 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 TM4SF19Q96DZ7 209 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 BTBD10Q9BSF8 475 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 SLC6A16Q9GZN6 736 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.06□□□□□ -0.32
VAPB-202ENST00000395802 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 TAS2R1Q9NYW7 299 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 SEMA5BQ9P283 1151 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 U3KQA8 63 aa13.06□□□□□ -0.32
VAPB-202ENST00000395802 H0YHG0 523 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 IL6P05231 212 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
VAPB-202ENST00000395802 KRT16P08779 473 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 ACP1P24666 158 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 CLDN8P56748 225 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
VAPB-202ENST00000395802 MMEL1Q495T6 779 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 OR4C11Q6IEV9 310 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 CYB5D1Q6P9G0 228 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 PAOXQ6QHF9 649 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 USP53Q70EK8 1073 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 POU5F2Q8N7G0 328 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 FBXO27Q8NI29 283 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 MS4A6EQ96DS6 147 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 F2RL3Q96RI0 385 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 CDC6Q99741 560 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 KLHL25Q9H0H3 589 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
VAPB-202ENST00000395802 FANCEQ9HB96 536 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 KLHL3Q9UH77 587 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 RALGAPA1Q6GYQ0 2036 aa13.05□□□□□ -0.32
VAPB-202ENST00000395802 LOC100653049A0A140TA62 436 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 FAM234BA2RU67 622 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 H0YGG7 62 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 PLPP1O14494 284 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 ERI3O43414 337 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 SH3BGRLO75368 114 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 KRT34O76011 436 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 KLK1P06870 262 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 ANKRD34CP0C6C1 535 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 MSL3P1P0C860 447 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 COX4I1P13073 169 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 MYF5P13349 255 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 CD1EP15812 388 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SDC1P18827 310 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SSR2P43308 183 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 POLR2JP52435 117 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 ARF3P61204 181 aaPredicted RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 PTGR1Q14914 329 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
VAPB-202ENST00000395802 SF3A2Q15428 464 aaKnown RBP13.04□□□□□ -0.32
VAPB-202ENST00000395802 NDUFA9Q16795 377 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms