RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ALBP02768 609 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 PROCP04070 461 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 UMODP07911 640 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 SERPINA6P08185 405 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 RPS17P08708 135 aaKnown RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF888P0CJ79 500 aaPredicted RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 ATP5F1P24539 256 aaPredicted RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 AVPR1BP47901 424 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 DSG2Q14126 1118 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 TBR1Q16650 682 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 HIST2H2ACQ16777 129 aaPredicted RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 UGT8Q16880 541 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 DEFB109BQ30KR1 87 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 CRTC2Q53ET0 693 aaPredicted RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 VWA2Q5GFL6 755 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 PAGE2BQ5JRK9 111 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 TOR1AIP1Q5JTV8 583 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 HIST2H2AA3Q6FI13 130 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 AFAP1L2Q8N4X5 818 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 OR52B6Q8NGF0 335 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 OR2Y1Q8NGV0 311 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 TCP10LQ8TDR4 215 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 ADAMTS17Q8TE56 1095 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 UTP15Q8TED0 518 aaKnown RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 CCT6BQ92526 530 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 SPSB2Q99619 263 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 YIPF2Q9BWQ6 316 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 C1QTNF3Q9BXJ4 246 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 RHBGQ9H310 441 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 ACTR8Q9H981 624 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 ZBTB26Q9HCK0 441 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 SEMA4BQ9NPR2 832 aaPredicted RBP15.7■□□□□ 0.1
CXCL1-201ENST00000395761 TRPC4Q9UBN4 977 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 PADI2Q9Y2J8 665 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 RNF11Q9Y3C5 154 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 NAALAD2Q9Y3Q0 740 aa15.7■□□□□ 0.1
CXCL1-201ENST00000395761 A0A1B0GTL3 188 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 LRIT2A6NDA9 550 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF860A6NHJ4 632 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 PLIN3O60664 434 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 CLEC3AO75596 197 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 KLHL18O94889 574 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ZWINTO95229 277 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 RECKO95980 971 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 SMIM10L1P0DMW3 83 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ALOX12P18054 663 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 TSPAN8P19075 237 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 FOLR3P41439 243 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 PIK3CGP48736 1102 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 CDH13P55290 713 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 RAB8AP61006 207 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 MPP2Q14168 576 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 DEFB134Q4QY38 66 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 UNC50Q53HI1 259 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 GRHL2Q6ISB3 625 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 MED27Q6P2C8 311 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 MYLK4Q86YV6 388 aaPredicted RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 LAS2Q8IYD9 372 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 PRSS58Q8IYP2 241 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 TTLQ8NG68 377 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 STT3BQ8TCJ2 826 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF483Q8TF39 744 aaPredicted RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 EXTL1Q92935 676 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 SMIM10Q96HG1 83 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 CDK15Q96Q40 435 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 IQCGQ9H095 443 aaKnown RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 SOX17Q9H6I2 414 aaPredicted RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 WDR54Q9H977 334 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ANKHQ9HCJ1 492 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 KCNK9Q9NPC2 374 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 HCN3Q9P1Z3 774 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF282Q9UDV7 671 aaPredicted RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 RALYQ9UKM9 306 aaKnown RBP15.69■□□□□ 0.1
CXCL1-201ENST00000395761 MAP4K5Q9Y4K4 846 aa15.69■□□□□ 0.1
CXCL1-201ENST00000395761 IGLV3-12A0A075B6K2 115 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 H0YIG0 161 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 H3BQF6 201 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 GALR3O60755 368 aaPredicted RBP15.68■□□□□ 0.1
CXCL1-201ENST00000395761 RDH16O75452 317 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 CD63P08962 238 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ZGLP1P0C6A0 271 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 PCNAP12004 261 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 IMPDH1P20839 514 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 HNRNPH1P31943 449 aaKnown RBP15.68■□□□□ 0.1
CXCL1-201ENST00000395761 OTX2P32243 289 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ETV4P43268 484 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 PRKAA2P54646 552 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 HERVK_113P63132 956 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 OCA2Q04671 838 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 HERC3Q15034 1050 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 ZNF678Q5SXM1 525 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 LIPJQ5W064 366 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 FAM219BQ5XKK7 198 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 LAPTM4BQ86VI4 370 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 RNF175Q8N4F7 328 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 L3MBTL4Q8NA19 623 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 OR7G3Q8NG95 312 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 OR5T3Q8NGG3 340 aa15.68■□□□□ 0.1
CXCL1-201ENST00000395761 RDH11Q8TC12 318 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms