RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IL7P13232 177 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 CNR2P34972 360 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 SLC11A2P49281 568 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 COL9A2Q14055 689 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 PRSS55Q6UWB4 352 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 SERPINA13PQ6UXR4 307 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 CCDC190Q86UF4 302 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 NFKBIDQ8NI38 313 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 TRPS1Q9UHF7 1281 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 RAB23Q9ULC3 237 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 ERVW-1Q9UQF0 538 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 Q9Y3F1 56 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 MAU2Q9Y6X3 613 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 PATJQ8NI35 1801 aa13.78□□□□□ -0.2
CLIP2-203ENST00000395060 EIF3FO00303 357 aaPredicted RBP13.77□□□□□ -0.2
CLIP2-203ENST00000395060 GAPDHSO14556 408 aaPredicted RBP13.77□□□□□ -0.2
CLIP2-203ENST00000395060 CYBAP13498 195 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 BPIP17213 487 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 AMD1P17707 334 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 HNF4AP41235 474 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 IRF8Q02556 426 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 SERPINA11Q86U17 422 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 TAGAPQ8N103 731 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 AQP11Q8NBQ7 271 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 NTMT1Q9BV86 223 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 SLC32A1Q9H598 525 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.2
CLIP2-203ENST00000395060 GLYATL1P3A0A0U1RQE8 302 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 H3BN98 237 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ERVH48-1M5A8F1 160 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 CDRT1O95170 752 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 CD160O95971 181 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 CCR7P32248 378 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 SOAT1P35610 550 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ATP5C1P36542 298 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 TUFMP49411 452 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 WNT3P56703 355 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ACSM2AQ08AH3 577 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 GPR50Q13585 617 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 CLPPQ16740 277 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 SMU1Q2TAY7 513 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 XKR6Q5GH73 641 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 FRG2Q64ET8 278 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ACSM2BQ68CK6 577 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 C1orf52Q8N6N3 182 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 OR4A15Q8NGL6 344 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 WFDC5Q8TCV5 224 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ASB15Q8WXK1 588 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 MYO19Q96H55 970 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 FRG2BQ96QU4 278 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PITX2Q99697 317 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 DUSP26Q9BV47 211 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 DYRK4Q9NR20 520 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 MAN2B2Q9Y2E5 1009 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PRAMEF25A6NGN4 478 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PLD2O14939 933 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ETHE1O95571 254 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 HIST1H2AGP0C0S8 130 aaPredicted RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 HIST1H2ADP20671 130 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PRIM2P49643 509 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 MC1RQ01726 317 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PYDC2Q56P42 97 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 OR52E4Q8NGH9 312 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PCNPQ8WW12 178 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 ASIC4Q96FT7 647 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 DIRAS2Q96HU8 199 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 HIST1H2AHQ96KK5 128 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 SMAD5Q99717 465 aaKnown RBP13.77□□□□□ -0.21
CLIP2-203ENST00000395060 HIST1H2AJQ99878 128 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 P2RY13Q9BPV8 354 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 H2AFJQ9BTM1 129 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 PCDHB1Q9Y5F3 818 aa13.77□□□□□ -0.21
CLIP2-203ENST00000395060 CCDC182A6NF36 153 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 H3BNC9 293 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 TBL1XO60907 577 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 ENTPD6O75354 484 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 PRPS2P11908 318 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CBLP22681 906 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 HNF1BP35680 557 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 HMGCLP35914 325 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 RPS26P62854 115 aaKnown RBP13.76□□□□□ -0.21
CLIP2-203ENST00000395060 ZNF79Q15937 498 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 GPRC6AQ5T6X5 926 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CTPS2Q9NRF8 586 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 OLA1Q9NTK5 396 aaKnown RBP13.76□□□□□ -0.21
CLIP2-203ENST00000395060 CFL2Q9Y281 166 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 PCDHGA2Q9Y5H1 932 aa13.76□□□□□ -0.21
CLIP2-203ENST00000395060 GCM2O75603 506 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms