RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TTLQ8NG68 377 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 OR5T3Q8NGG3 340 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 UTP15Q8TED0 518 aaKnown RBP18.89■□□□□ 0.61
SNCA-203ENST00000394986 ATP6V1E2Q96A05 226 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 SPSB2Q99619 263 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 C1QTNF3Q9BXJ4 246 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 PRM3Q9NNZ6 103 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 MKS1Q9NXB0 559 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 TRPC4Q9UBN4 977 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 PADI2Q9Y2J8 665 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 SLC22A7Q9Y694 548 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 MGAQ8IWI9 3026 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 RGS16O15492 202 aaPredicted RBP18.88■□□□□ 0.61
SNCA-203ENST00000394986 DNAJB6O75190 326 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 SH3BGRLO75368 114 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 SUPT7LO94864 414 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 UMODP07911 640 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 ALOX12P18054 663 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 FOLR3P41439 243 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 CCNG1P51959 295 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 PRKAA2P54646 552 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 MC1RQ01726 317 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 DDX39BQ13838 428 aaKnown RBP18.88■□□□□ 0.61
SNCA-203ENST00000394986 CPSF6Q16630 551 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNCA-203ENST00000394986 VWA2Q5GFL6 755 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 LIPJQ5W064 366 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 LAS2Q8IYD9 372 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 ARMC2Q8NEN0 867 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 OR7G3Q8NG95 312 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 OR2Y1Q8NGV0 311 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 STT3BQ8TCJ2 826 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 TRPC4APQ8TEL6 797 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 SLC26A1Q9H2B4 701 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 RHBGQ9H310 441 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 SLC17A7Q9P2U7 560 aa18.88■□□□□ 0.61
SNCA-203ENST00000394986 ZNF282Q9UDV7 671 aaPredicted RBP18.88■□□□□ 0.61
SNCA-203ENST00000394986 SEC16AO15027 2179 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 PRPF4O43172 522 aaKnown RBP eCLIP18.87■□□□□ 0.61
SNCA-203ENST00000394986 CLEC3AO75596 197 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 ALBP02768 609 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 IMPDH1P20839 514 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 OTX2P32243 289 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 OLR1P78380 273 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 CLCQ05315 142 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 HERC3Q15034 1050 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 UGT8Q16880 541 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 DEFB109BQ30KR1 87 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 LRIG3Q6UXM1 1119 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 ABHD13Q7L211 337 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 SLC22A9Q8IVM8 553 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 L3MBTL4Q8NA19 623 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 PPP4R1Q8TF05 950 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 ZNF473Q8WTR7 871 aaKnown RBP18.87■□□□□ 0.61
SNCA-203ENST00000394986 FAM111AQ96PZ2 611 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 SMC6Q96SB8 1091 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 IQCGQ9H095 443 aaKnown RBP18.87■□□□□ 0.61
SNCA-203ENST00000394986 PLLPQ9Y342 182 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 MAP4K5Q9Y4K4 846 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 LOC400499M0QZD8 3231 aa18.87■□□□□ 0.61
SNCA-203ENST00000394986 LRIT2A6NDA9 550 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 VSTM2BA6NLU5 285 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 H0YIG0 161 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 ERI3O43414 337 aaKnown RBP18.86■□□□□ 0.61
SNCA-203ENST00000394986 UGDHO60701 494 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 GALR3O60755 368 aaPredicted RBP18.86■□□□□ 0.61
SNCA-203ENST00000394986 CLDN9O95484 217 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 ZGLP1P0C6A0 271 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 CPA3P15088 417 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 GSTM2P28161 218 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 OCA2Q04671 838 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 ZRSR2Q15696 482 aaKnown RBP18.86■□□□□ 0.61
SNCA-203ENST00000394986 ZC3H7AQ8IWR0 971 aaKnown RBP18.86■□□□□ 0.61
SNCA-203ENST00000394986 CCNYL1Q8N7R7 359 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 OR4F6Q8NGB9 312 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 HUS1BQ8NHY5 278 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 ADAMTS17Q8TE56 1095 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 EXTL1Q92935 676 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 UBE2E3Q969T4 207 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 MIEF2Q96C03 454 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 MS4A6EQ96DS6 147 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 L3HYPDHQ96EM0 354 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 F2RL3Q96RI0 385 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 MESP1Q9BRJ9 268 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 NTMT1Q9BV86 223 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 RBCK1Q9BYM8 510 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 FAM117AQ9C073 453 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 WDR54Q9H977 334 aa18.86■□□□□ 0.61
SNCA-203ENST00000394986 IGLV3-12A0A075B6K2 115 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 JRKO75564 520 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 TGFB1P01137 390 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 SMIM10L1P0DMW3 83 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 STXBP1P61764 594 aaKnown RBP18.85■□□□□ 0.61
SNCA-203ENST00000394986 KLC1Q07866 573 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 PCLAFQ15004 111 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 TBR1Q16650 682 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 CRTC2Q53ET0 693 aaPredicted RBP18.85■□□□□ 0.61
SNCA-203ENST00000394986 LETMD1Q6P1Q0 360 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 MILR1Q7Z6M3 343 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 LAPTM4BQ86VI4 370 aa18.85■□□□□ 0.61
SNCA-203ENST00000394986 MYRIPQ8NFW9 859 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms