RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CHCHD4Q8N4Q1 142 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 KRTCAP2Q8N6L1 136 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
RTN4-205ENST00000394609 GOLM1Q8NBJ4 401 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 TMEM145Q8NBT3 493 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 ZNF740Q8NDX6 193 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 DENND6BQ8NEG7 585 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 OR7G3Q8NG95 312 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 HUS1BQ8NHY5 278 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 JPH3Q8WXH2 748 aaPredicted RBP6.67□□□□□ -1.34
RTN4-205ENST00000394609 SH3KBP1Q96B97 665 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 APIPQ96GX9 242 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 WDR92Q96MX6 357 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 TUBA1CQ9BQE3 449 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 BRINP2Q9C0B6 783 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 CLK4Q9HAZ1 481 aaKnown RBP6.67□□□□□ -1.34
RTN4-205ENST00000394609 SLC52A3Q9NQ40 469 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 C1orf109Q9NX04 203 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 WSB2Q9NYS7 404 aaPredicted RBP6.67□□□□□ -1.34
RTN4-205ENST00000394609 ADA2Q9NZK5 511 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 WNT16Q9UBV4 365 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 TAC3Q9UHF0 121 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 EIF3LQ9Y262 564 aaKnown RBP6.67□□□□□ -1.34
RTN4-205ENST00000394609 DLGAP4Q9Y2H0 992 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 NDUFAF1Q9Y375 327 aa6.67□□□□□ -1.34
RTN4-205ENST00000394609 IGHV1OR15-9A0A0B4J2B8 117 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 MAGEB17A8MXT2 336 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PRAMEF26H0Y7S4 382 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 H3BSA7 217 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ANKRD28O15084 1053 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PI15O43692 258 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ETHE1O95571 254 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 APBB3O95704 486 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 IGLV3-19P01714 112 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 RPN2P04844 631 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 HOXC4P09017 264 aaPredicted RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 C1GALT1C1LP0DN25 315 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 BCKDHAP12694 445 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CDH1P12830 882 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 S100A1P23297 94 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ME2P23368 584 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 TACR1P25103 407 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 HOXD12P35452 270 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ADH7P40394 386 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 HNF4AP41235 474 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ZFP36L2P47974 494 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 POLR2JP52435 117 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 DGKQP52824 942 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ATXN3P54252 364 aaPredicted RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 SRP54P61011 504 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 PSME3P61289 254 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PLIN5Q00G26 463 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 TRAP1Q12931 704 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 CEACAM7Q14002 265 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 RCAN2Q14206 197 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CAPRIN1Q14444 709 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
RTN4-205ENST00000394609 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 RPE65Q16518 533 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 MOGQ16653 247 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ALG11Q2TAA5 492 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 UAP1L1Q3KQV9 507 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PRAMEF14Q5SWL7 426 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CACHD1Q5VU97 1274 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PRAMEF13Q5VWM6 474 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 GRHL2Q6ISB3 625 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SLC22A18ASQ8N1D0 253 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 LINC01555Q8NAE3 123 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 FAM156AQ8NDB6 213 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 HIPK4Q8NE63 616 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 WDR20Q8TBZ3 569 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 PNPT1Q8TCS8 783 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 GIPC3Q8TF64 312 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SLC5A11Q8WWX8 675 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 RMND5BQ96G75 393 aaPredicted RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 SHDQ96IW2 340 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 APOLD1Q96LR9 279 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CNBD2Q96M20 576 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 CAMK1GQ96NX5 476 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 MENTQ9BUN1 341 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 EFHD1Q9BUP0 239 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 TRIM8Q9BZR9 551 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SPNS1Q9H2V7 528 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 TCEAL2Q9H3H9 227 aaPredicted RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 TBC1D17Q9HA65 648 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 GPRC5BQ9NZH0 403 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 ZIM2Q9NZV7 527 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SLAMF8Q9P0V8 285 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.66□□□□□ -1.34
RTN4-205ENST00000394609 PCDHGA7Q9Y5G6 932 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 USP34Q70CQ2 3546 aa6.66□□□□□ -1.34
RTN4-205ENST00000394609 A0A1W2PP18 115 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms