RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 GK3PQ14409 553 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 RSPO4Q2I0M5 234 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 PGS1Q32NB8 556 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 ZNF658BQ4V348 819 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 FAM98BQ52LJ0 330 aaKnown RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 RUNDC3AQ59EK9 446 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 TMTC4Q5T4D3 741 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 DBX2Q6ZNG2 339 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 MSANTD1Q6ZTZ1 278 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 CHERPQ8IWX8 916 aaKnown RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 MSRB3Q8IXL7 192 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 TMEM132CQ8N3T6 1108 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 FBXO15Q8NCQ5 510 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 OR10A6Q8NH74 314 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 FIG4Q92562 907 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 FCRL1Q96LA6 429 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 PAIP1Q9H074 479 aaKnown RBP11.84□□□□□ -0.51
TUBD1-205ENST00000394239 ZNF696Q9H7X3 374 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 GPRC5BQ9NZH0 403 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 VPS29Q9UBQ0 182 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 MAN2B2Q9Y2E5 1009 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 KCNE2Q9Y6J6 123 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 DGKBQ9Y6T7 804 aa11.84□□□□□ -0.51
TUBD1-205ENST00000394239 ARID1BQ8NFD5 2236 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 TNFRSF10CO14798 259 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 VEGFDO43915 354 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PCDHGA12O60330 932 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 FOXD2O60548 495 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PRMT3O60678 531 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 MYO1DO94832 1006 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 LRATO95237 230 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 RASGRP1O95267 797 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 MYF5P13349 255 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 HSD3B1P14060 373 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 HSD3B2P26439 372 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 KIR3DL1P43629 444 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 LIMK1P53667 647 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PNLIPRP1P54315 467 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 MYBPC1Q00872 1141 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PCDH1Q08174 1060 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 DPY19L1Q2PZI1 675 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 LRIF1Q5T3J3 769 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 CAPN13Q6MZZ7 669 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 GPR180Q86V85 440 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 CARM1Q86X55 608 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 NRROSQ86YC3 692 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 EPHX4Q8IUS5 362 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 ZNF547Q8IVP9 402 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 SYTL1Q8IYJ3 562 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 RNF175Q8N4F7 328 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 LMX1AQ8TE12 382 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 LINC00615Q96LM1 132 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 RNF145Q96MT1 663 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 OR4K3Q96R72 315 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 MTERF1Q99551 399 aaKnown RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 BDH2Q9BUT1 245 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 EBPLQ9BY08 206 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 GORASP2Q9H8Y8 452 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 CARS2Q9HA77 564 aaKnown RBP11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PPT2Q9UMR5 302 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 OAZ3Q9UMX2 235 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PCDHB14Q9Y5E9 798 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 PCDHGA11Q9Y5H2 935 aa11.83□□□□□ -0.52
TUBD1-205ENST00000394239 TRBV5-3A0A0A0MS03 114 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 C17orf113A0A1B0GUU1 675 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 ELOVL7A1L3X0 281 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 PDLIM1O00151 329 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 POP7O75817 140 aaKnown RBP11.82□□□□□ -0.52
TUBD1-205ENST00000394239 RASAL1O95294 804 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 SMIM18P0DKX4 95 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 RAP2AP10114 183 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 PCNAP12004 261 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 KELP23276 732 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
TUBD1-205ENST00000394239 HNRNPKP61978 463 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBD1-205ENST00000394239 PHC1P78364 1004 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 ACSM2AQ08AH3 577 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 GTDC1Q4AE62 458 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 PYCR3Q53H96 274 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 NHSL2Q5HYW2 709 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 FOXB2Q5VYV0 432 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 ATG9BQ674R7 924 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 ACSM2BQ68CK6 577 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 KRT80Q6KB66 452 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 IYDQ6PHW0 289 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 CRTC3Q6UUV7 619 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 SPRED1Q7Z699 444 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 RIMKLAQ8IXN7 391 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 OXR1Q8N573 874 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 HM13Q8TCT9 377 aa11.82□□□□□ -0.52
TUBD1-205ENST00000394239 NETO1Q8TDF5 533 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms