RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CD63P08962 238 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SNRPAP09012 282 aaKnown RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SFTPCP11686 197 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PCNAP12004 261 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 COX6A1P12074 109 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PLA2G2AP14555 144 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ACPPP15309 386 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ALOX12P18054 663 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ITGA3P26006 1051 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 AHRP35869 848 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PGDP52209 483 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 EMP2P54851 167 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 IRF8Q02556 426 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 Q0VFX4 171 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PWP1Q13610 501 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SETDB1Q15047 1291 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ACAP2Q15057 778 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 TUBB8Q3ZCM7 444 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 NADK2Q4G0N4 442 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 CDKL4Q5MAI5 379 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLC3Q6P597 504 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ADGRD1Q6QNK2 874 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 LANCL3Q6ZV70 420 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 MED25Q71SY5 747 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 LRRC70Q7Z2Q7 622 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF605Q86T29 641 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 MYLK4Q86YV6 388 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 GALNT16Q8N428 558 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 AFAP1L2Q8N4X5 818 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 TBC1D19Q8N5T2 526 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PTGR2Q8N8N7 351 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 TMEM102Q8N9M5 508 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR11G2Q8NGC1 345 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 OR2W6PQ8NHA6 318 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 RHEBL1Q8TAI7 183 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 UBTD2Q8WUN7 234 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 TSLPQ969D9 159 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PHF21BQ96EK2 531 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 CDK15Q96Q40 435 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC6A16Q9GZN6 736 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 VN1R1Q9GZP7 353 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 RHBGQ9H310 441 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZBTB20Q9HC78 741 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF160Q9HCG1 818 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 PRM3Q9NNZ6 103 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 MKKSQ9NPJ1 570 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SEMA3GQ9NS98 782 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 GPR83Q9NYM4 423 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 GPRC5BQ9NZH0 403 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 OPTCQ9UBM4 332 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 NXT1Q9UKK6 140 aaKnown RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZNF490Q9ULM2 529 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 HEMK1Q9Y5R4 338 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLC22A7Q9Y694 548 aa7.25□□□□□ -1.25
HMGB3P1-201ENST00000393368 A0A1W2PPM1 405 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 LRIT2A6NDA9 550 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SYCE1LA8MT33 242 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 FAM227AF5H4B4 570 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 H0YIG0 161 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SAP18O00422 153 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 RTCAO00442 366 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ERI3O43414 337 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SUV39H1O43463 412 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CHST10O43529 356 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 KLK8O60259 260 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 B4GALT2O60909 372 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CEACAM4O75871 244 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SEC24DO94855 1032 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SLU7O95391 586 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SERPINA6P08185 405 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SBK3P0C264 359 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SMIM10L1P0DMW3 83 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 TSPAN8P19075 237 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CNTFP26441 200 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 TNFRSF8P28908 595 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 EEF1DP29692 281 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 PIK3CGP48736 1102 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CD97P48960 835 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 PLA2G16P53816 162 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ALDH18A1P54886 795 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 RRADP55042 308 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 BTN3A2P78410 334 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 DDX39BQ13838 428 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 NAA30Q147X3 362 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 HERC3Q15034 1050 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 TCTN3Q6NUS6 607 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ABHD13Q7L211 337 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 GOLGA7Q7Z5G4 137 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CCDC91Q7Z6B0 441 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CYP4X1Q8N118 509 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 KRT78Q8N1N4 520 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 CLEC1AQ8NC01 280 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 TRPV3Q8NET8 790 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 EPS8L3Q8TE67 593 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 MZB1Q8WU39 189 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 ZBTB9Q96C00 473 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 MS4A6EQ96DS6 147 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 SMIM10Q96HG1 83 aa7.24□□□□□ -1.25
HMGB3P1-201ENST00000393368 FER1L6-AS2Q96M78 137 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms