RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MRGPRX2Q96LB1 330 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 TM9SF2Q99805 663 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 TBL1XR1Q9BZK7 514 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 FXYD6Q9H0Q3 95 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 TRPV4Q9HBA0 871 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
LCA5-202ENST00000392959 FKBP14Q9NWM8 211 aa12.7□□□□□ -0.38
LCA5-202ENST00000392959 L7N2F9 121 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 LDB2O43679 373 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CCKBRP32239 447 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 RAB8AP61006 207 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 LSAMPQ13449 338 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 GDF6Q6KF10 455 aaPredicted RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 ALKBH2Q6NS38 261 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CEP97Q8IW35 865 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CYB5D2Q8WUJ1 264 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 B4GALT6Q9UBX8 382 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CYTH4Q9UIA0 394 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 A0A0D9SEW6 157 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 A0A0G2JPF8 293 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 HNRNPCL3B7ZW38 293 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 S1PR4O95977 384 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CHRNA1P02708 482 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 HNRNPCL4P0DMR1 293 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PRKCZQ05513 592 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 GINS1Q14691 196 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 STEAP4Q687X5 459 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 EIF5AL1Q6IS14 154 aaKnown RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 C22orf39Q6P5X5 142 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 TMEM17Q86X19 198 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 UMODL1-AS1Q8N2C9 162 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 LGALS12Q96DT0 336 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 TXLNGYQ9BZA5 131 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 ZNF69Q9UC07 566 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 Q9Y3F1 56 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 COL1A1P02452 1464 aaPredicted RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 INMT-MINDY4F8WBC2 141 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PROM1O43490 865 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 GSTT2P0CG29 244 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PGAM2P15259 253 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CXCR1P25024 350 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 MAGEA11P43364 429 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 BLKP51451 505 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 RPP38P78345 283 aaKnown RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 BTN3A2P78410 334 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PIGFQ07326 219 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 PDGFRLQ15198 375 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 HACD2Q6Y1H2 254 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 SLC36A4Q6YBV0 504 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 ABHD13Q7L211 337 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
LCA5-202ENST00000392959 SPERTQ8NA61 448 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 BRI3BPQ8WY22 251 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 REEP4Q9H6H4 257 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 RDH8Q9NYR8 311 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 ABCG2Q9UNQ0 655 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 NOTOA8MTQ0 251 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 KAT7O95251 611 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 MT-ND2P03891 347 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 CELP19835 753 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
LCA5-202ENST00000392959 TRAM2Q15035 370 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 BLOC1S3Q6QNY0 202 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 ENPP7Q6UWV6 458 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 Q6ZVL8 140 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 ZDHHC14Q8IZN3 488 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 RNF38Q9H0F5 515 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 TAS2R10Q9NYW0 307 aa12.69□□□□□ -0.38
LCA5-202ENST00000392959 SH3PXD2BA1X283 911 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 SNNO75324 88 aaPredicted RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 HAPLN1P10915 354 aaPredicted RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 BCKDHAP12694 445 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ZNF20P17024 532 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 PREPP48147 710 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 CLCN2P51788 898 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 PGGT1BP53609 377 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 CDKL1Q00532 357 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
LCA5-202ENST00000392959 SCML4Q8N228 414 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 YIPF7Q8N8F6 280 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 OR9A1PQ8NGU1 263 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 NR4A3Q92570 626 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 FIZ1Q96SL8 496 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 HERPUD2Q9BSE4 406 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 SMOXQ9NWM0 555 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 ERVK-18Q9QC07 812 aa12.68□□□□□ -0.38
LCA5-202ENST00000392959 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms