RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 ADH5P11766 374 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 IL7RP16871 459 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 IGFBP5P24593 272 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 BDKRB1P46663 353 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 DHCR24Q15392 516 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CARTPTQ16568 116 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 HIST2H2ACQ16777 129 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 ZXDCQ2QGD7 858 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 HIST2H2AA3Q6FI13 130 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 OR2T5Q6IEZ7 315 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 YAF2Q8IY57 180 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 C1orf52Q8N6N3 182 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 OR10Q1Q8NGQ4 319 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 OR2T29Q8NH02 315 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 WFIKKN2Q8TEU8 576 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 DYRK4Q9NR20 520 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 SH3BP4Q9P0V3 963 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 DEC1Q9P2X7 70 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 DENND4CQ5VZ89 1909 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 FADS2P1A8MWK0 482 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 ATP6V1G2-DDX39BF2Z307 99 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 TRIM77I1YAP6 450 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 BCKDKO14874 412 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 UGT2B11O75310 529 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 FABP3P05413 133 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 DCKP27707 260 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CTSCP53634 463 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 MTAPQ13126 283 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 IL18R1Q13478 541 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 NPTX1Q15818 432 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 MEP1AQ16819 746 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 UGT8Q16880 541 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CLVS2Q5SYC1 327 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CAPN13Q6MZZ7 669 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 MED27Q6P2C8 311 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 RTL10Q7L3V2 364 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 RASGEF1AQ8N9B8 481 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 PJA1Q8NG27 643 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 TTLQ8NG68 377 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 ZFYVE19Q96K21 471 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CNDP2Q96KP4 475 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 TM9SF3Q9HD45 589 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 UTS2RQ9UKP6 389 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 H0YIV9 168 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 PRAMEF4O60810 478 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 SRPRAP08240 638 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CCNA2P20248 432 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 CRHBPP24387 322 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 KDELR2P33947 212 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 PRLHRP49683 370 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 GZMMP51124 257 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 EPHA5P54756 1037 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 ZNF77Q15935 545 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 SPIN4Q56A73 249 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 PRAMEF9Q5VWM5 478 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 SHEQ5VZ18 495 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 SHQ1Q6PI26 577 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 ANGPTL8Q6UXH0 198 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 LIPIQ6XZB0 460 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 TMPRSS11BQ86T26 416 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 NRSN1Q8IZ57 195 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 OR8J2Q8NGG1 315 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 FRS2Q8WU20 508 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 VOPP1Q96AW1 172 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 WRAP53Q9BUR4 548 aaKnown RBP9.29□□□□□ -0.92
COL6A3-204ENST00000392003 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 RUBCNLQ9H714 662 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 BRF2Q9HAW0 419 aa9.29□□□□□ -0.92
COL6A3-204ENST00000392003 TSPAN11A1L157 253 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 TBC1D3BA6NDS4 549 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 TMEM202A6NGA9 273 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 H3BMQ9 156 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 B4GAT1O43505 415 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 SLC16A8O95907 504 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 B3GALT4O96024 378 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 PRNPP04156 253 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
COL6A3-204ENST00000392003 JUNBP17275 347 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-204ENST00000392003 GABARAPL2P60520 117 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 CD47Q08722 323 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 STARD3Q14849 445 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 PAGE2BQ5JRK9 111 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 CPZQ66K79 652 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 CORO6Q6QEF8 472 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 DCP2Q8IU60 420 aaKnown RBP9.28□□□□□ -0.92
COL6A3-204ENST00000392003 TRAPPC5Q8IUR0 188 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 BPIFB6Q8NFQ5 453 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 COG8Q96MW5 612 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 PKP4Q99569 1192 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 REEP1Q9H902 201 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 TPT1P8Q9HAU6 139 aa9.28□□□□□ -0.92
COL6A3-204ENST00000392003 SPATA6Q9NWH7 488 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-204ENST00000392003 ADPRHL2Q9NX46 363 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms