RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 ANKRD53Q8N9V6 530 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 OR51Q1Q8NH59 317 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 DCAKDQ8WVC6 231 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 GAL3ST3Q96A11 431 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 MTBPQ96DY7 904 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 MACROD1Q9BQ69 325 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 NUDT9Q9BW91 350 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 VPS11Q9H270 941 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 MKL2Q9ULH7 1088 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 NAALAD2Q9Y3Q0 740 aa11.99□□□□□ -0.49
GGPS1-203ENST00000391855 TNPO3Q9Y5L0 923 aaKnown RBP11.99□□□□□ -0.49
GGPS1-203ENST00000391855 CCDC88CQ9P219 2028 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 NSG1A0A0A6YYJ2 146 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 ANKDD1BA6NHY2 528 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 A6NL46 340 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 ALOX12BO75342 701 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 PDGFAP04085 211 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 SNRPAP09012 282 aaKnown RBP11.98□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF888P0CJ79 500 aaPredicted RBP11.98□□□□□ -0.49
GGPS1-203ENST00000391855 C8orf89P0DMQ9 161 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 COX6A1P12074 109 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 MTHFD2P13995 350 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 GFAPP14136 432 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 EPB42P16452 691 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 NR1D1P20393 614 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 ITGA3P26006 1051 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 TNFRSF8P28908 595 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 CASP2P42575 452 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 GLRBP48167 497 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 KCNC1P48547 511 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 AGTR2P50052 363 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 ALDH18A1P54886 795 aaKnown RBP11.98□□□□□ -0.49
GGPS1-203ENST00000391855 TGM3Q08188 693 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 SYT16Q17RD7 645 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 DEFB134Q4QY38 66 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 TECRLQ5HYJ1 363 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 TMEM205Q6UW68 189 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 NDUFAF7Q7L592 441 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 PRSS41Q7RTY9 318 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 LCA5Q86VQ0 697 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 PDSS2Q86YH6 399 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.98□□□□□ -0.492e-8■■■■■ 35.8
GGPS1-203ENST00000391855 ADAMTS18Q8TE60 1221 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 UTP15Q8TED0 518 aaKnown RBP11.98□□□□□ -0.49
GGPS1-203ENST00000391855 CREB3L4Q8TEY5 395 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 MOCOSQ96EN8 888 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 LHPPQ9H008 270 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 HCN3Q9P1Z3 774 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 SPTA1P02549 2419 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 PIEZO2Q9H5I5 2752 aa11.98□□□□□ -0.49
GGPS1-203ENST00000391855 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 K7EM74 188 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 FFAR3O14843 346 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 GPR42O15529 346 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 SMIM10L1P0DMW3 83 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 GMPRP36959 345 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 HYAL2Q12891 473 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 CHIT1Q13231 466 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 DOC2AQ14183 400 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 MINDY4Q4G0A6 757 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TOR1AIP1Q5JTV8 583 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 MFSD4BQ5TF39 518 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 IGFL3Q6UXB1 125 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 RIPOR1Q6ZS17 1223 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 LAPTM4BQ86VI4 370 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TMEM151BQ8IW70 566 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
GGPS1-203ENST00000391855 ESAMQ96AP7 390 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TBC1D20Q96BZ9 403 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 SMIM10Q96HG1 83 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 FAR2Q96K12 515 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 GPR78Q96P69 363 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 CCDC77Q9BR77 488 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TUBB6Q9BUF5 446 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 NPLQ9BXD5 320 aaPredicted RBP11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TXLNGYQ9BZA5 131 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 VN1R1Q9GZP7 353 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 RHBGQ9H310 441 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF552Q9H707 407 aaPredicted RBP11.97□□□□□ -0.49
GGPS1-203ENST00000391855 PPCSQ9HAB8 311 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 ADGRE2Q9UHX3 823 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 ANGPTL3Q9Y5C1 460 aa11.97□□□□□ -0.49
GGPS1-203ENST00000391855 TLN1Q9Y490 2541 aaKnown RBP11.97□□□□□ -0.49
GGPS1-203ENST00000391855 MED13Q9UHV7 2174 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 IGHV1-45A0A0A0MS14 117 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ZNF860A6NHJ4 632 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PSMD12O00232 456 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 SERPINA7P05543 415 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 FHP07954 510 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ICAM2P13598 275 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 EPORP19235 508 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 HNF4AP41235 474 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 SNRPNP63162 240 aaKnown RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 TLE1Q04724 770 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 EEF1A2Q05639 463 aaKnown RBP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 PCBP2Q15366 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
GGPS1-203ENST00000391855 ADPRMQ3LIE5 342 aa11.96□□□□□ -0.49
GGPS1-203ENST00000391855 FBXO48Q5FWF7 155 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms