RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CNPY1Q3B7I2 92 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TBRG1Q3YBR2 411 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LGALSLQ3ZCW2 172 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CBWD6Q4V339 395 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PARP10Q53GL7 1025 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C2orf27AQ580R0 203 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 Q5BKY6 102 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CBWD3Q5JTY5 395 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF569Q5MCW4 686 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CBWD5Q5RIA9 395 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LIPJQ5W064 366 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC22A10Q63ZE4 541 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SIGIRRQ6IA17 410 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MTFR2Q6P444 385 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CNNM4Q6P4Q7 775 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 RFWD3Q6PCD5 774 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ARSKQ6UWY0 536 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 Q6ZR03 302 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA0408Q6ZU52 694 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LCA10Q71F78 164 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MCM10Q7L590 875 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 OLIG3Q7RTU3 272 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ADM2Q7Z4H4 148 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAJB7Q7Z6W7 309 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM110Q86TL2 294 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 METTL16Q86W50 562 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CHD1LQ86WJ1 897 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF573Q86YE8 665 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 EGFL6Q8IUX8 553 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC117Q8IWD4 279 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C12orf56Q8IXR9 622 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF100Q8IYN0 542 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 OR4N4Q8N0Y3 316 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GHDCQ8N2G8 530 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PYROXD2Q8N2H3 581 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MIER2Q8N344 545 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CADM2Q8N3J6 435 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SDR16C5Q8N3Y7 309 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CHCHD4Q8N4Q1 142 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ESX1Q8N693 406 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MAPKAPK5-AS1Q8N8E1 139 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX19Q8NA77 164 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LRRC75AQ8NAA5 344 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 C15orf53Q8NAA6 179 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC37A3Q8NCC5 494 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNRF1Q8ND25 227 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAAF1Q8NEP3 725 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 OR9Q2Q8NGE9 314 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 OR5L2Q8NGL0 311 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CMTM2Q8TAZ6 248 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PMFBP1Q8TBY8 1022 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SPPL3Q8TCT6 385 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MORC4Q8TE76 937 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 LEO1Q8WVC0 666 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ANKRD49Q8WVL7 239 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 WDR60Q8WVS4 1066 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PIGCQ92535 297 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DCUN1D4Q92564 292 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TAF4BQ92750 862 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KCNJ9Q92806 393 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 NABP1Q96AH0 204 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF185Q96GF1 192 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SNX22Q96L94 193 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SGK494Q96LW2 274 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ODF3Q96PU9 254 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CSPG4P5Q96PW8 444 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SMIM14Q96QK8 99 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SIN3AQ96ST3 1273 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CNPY3Q9BT09 278 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TIMM21Q9BVV7 248 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 IFIH1Q9BYX4 1025 aaKnown RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GCOM2Q9BZD3 368 aaPredicted RBP-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM129AQ9BZQ8 928 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 TGIF2Q9GZN2 237 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZMYND12Q9H0C1 365 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CYSTM1Q9H1C7 97 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 GLIPR2Q9H4G4 154 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC134Q9H6E4 229 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 IFT22Q9H7X7 185 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ARMT1Q9H993 441 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 NOX3Q9HBY0 568 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 NEK6Q9HC98 313 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 PDE11AQ9HCR9 933 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 SAYSD1Q9NPB0 183 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 A4GALTQ9NPC4 353 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 UBQLN4Q9NRR5 601 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 CA10Q9NS85 328 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF355PQ9NSJ1 428 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 STARD5Q9NSY2 213 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DEPPQ9NTK1 212 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ABCB8Q9NUT2 735 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 IMPAD1Q9NX62 359 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 MIOSQ9NXC5 875 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 P4HTMQ9NXG6 502 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 DACT1Q9NYF0 836 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KLK11Q9UBX7 282 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF212Q9UDV6 495 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 KLQ9UEF7 1012 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 STAP2Q9UGK3 403 aa-0.44□□□□□ -2.48
TRAJ28-201ENST00000390509 UBQLN2Q9UHD9 624 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms