RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 LURAP1LQ8IV03 231 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 TMEM132CQ8N3T6 1108 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ZBTB44Q8NCP5 570 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 AKAP1Q92667 903 aaKnown RBP eCLIP14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 RNF34Q969K3 372 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 UPRTQ96BW1 309 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 GIMAP5Q96F15 307 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ZBED6CLQ96FA7 236 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 FEVQ99581 238 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 GPR21Q99679 349 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 MARVELD1Q9BSK0 173 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 CCM2Q9BSQ5 444 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 RACGAP1Q9H0H5 632 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 CATSPERZQ9NTU4 200 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 RPS6KA6Q9UK32 745 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF451Q9Y4E5 1061 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 FABP7O15540 132 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 DPM1O60762 260 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ATG13O75143 517 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 RAF1P04049 648 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 THP07101 528 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ASGR1P07306 291 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 ITGB7P26010 798 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 THPOP40225 353 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 UBE3AQ05086 875 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC14A1Q13336 389 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 GRK1Q15835 563 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 KCNA10Q16322 511 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 LINC00518Q8N0U6 118 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 CLHC1Q8NHS4 586 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 KIAA1143Q96AT1 154 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 NT5MQ9NPB1 228 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 NLKQ9UBE8 527 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 VPS9D1Q9Y2B5 631 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 MAN2B2Q9Y2E5 1009 aa14.13□□□□□ -0.15
VPS9D1-201ENST00000389386 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PRR23AA6NEV1 266 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 M0R129 80 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC43A1O75387 559 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PPM1BO75688 479 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TSPAN12O95859 305 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PEX11BO96011 259 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TPOP07202 933 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 KDELR2P33947 212 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SOX3P41225 446 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ITKQ08881 620 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TIGD5Q53EQ6 642 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 GPR139Q6DWJ6 353 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 DOK6Q6PKX4 331 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 KLHL17Q6TDP4 642 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SUSD1Q6UWL2 747 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TAC4Q86UU9 113 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 NKAPQ8N5F7 415 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 OR4L1Q8NH43 312 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 WDR36Q8NI36 951 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ULK4Q96C45 1275 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 RTP3Q9BQQ7 232 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TMEM184CQ9NVA4 438 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 DIMT1Q9UNQ2 313 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ARL5AQ9Y689 179 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 NYNRINQ9P2P1 1898 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PCDH17O14917 1159 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 OR1I1O60431 355 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PLOD3O60568 738 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 B3GAT3O94766 335 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 LGI1O95970 557 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 HLA-DQB1P01920 261 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 CDKN2CP42773 168 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ABATP80404 500 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 MADCAM1Q13477 382 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PCBP1Q15365 356 aaKnown RBP eCLIP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 MZT2BQ6NZ67 158 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 EIF3MQ7L2H7 374 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 BHLHA9Q7RTU4 235 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 MILR1Q7Z6M3 343 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 DDX53Q86TM3 631 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ADGRG3Q86Y34 549 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PHC2Q8IXK0 858 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TIGD4Q8IY51 512 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 GHDCQ8N2G8 530 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TTLQ8NG68 377 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 CHTF18Q8WVB6 975 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC25A46Q96AG3 418 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 C7orf34Q96L11 122 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 GFM1Q96RP9 751 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 MRPL39Q9NYK5 338 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SEC14L4Q9UDX3 406 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PLEKHB1Q9UF11 243 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ATP6V1HQ9UI12 483 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC6A14Q9UN76 642 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 PCDHGB3Q9Y5G1 929 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 TRPV2Q9Y5S1 764 aa14.12□□□□□ -0.15
VPS9D1-201ENST00000389386 ANKRD36A6QL64 1941 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 FAM240BA0A1B0GVZ2 78 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 B3GALT4O96024 378 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms