RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 PIPSLA2A3N6 862 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 PFDN1O60925 122 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 ADH1CP00326 375 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 POU2F2P09086 479 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 FURINP09958 794 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 CYP4B1P13584 511 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 EPCAMP16422 314 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 FMO3P31513 532 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 CTNNB1P35222 781 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 PIK3CBP42338 1070 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 BMXP51813 675 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 C21orf59P57076 290 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 CSNK2BP67870 215 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 TAP2Q03519 686 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 FCHO2Q0JRZ9 810 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 NPRL3Q12980 569 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 AQP6Q13520 282 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 CTF1Q16619 201 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 LAIR1Q6GTX8 287 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 NXPE4Q6UWF7 544 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 METTL4Q8N3J2 472 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 ATG16L2Q8NAA4 619 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 OR52N2Q8NGI0 321 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 TRUB1Q8WWH5 349 aaKnown RBP14.36□□□□□ -0.11
SCFD2-201ENST00000388940 SLC5A11Q8WWX8 675 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 ARRDC3Q96B67 414 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 GABARAPL3Q9BY60 117 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 CCDC90BQ9GZT6 254 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 OR2AG1Q9H205 316 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 GPATCH2Q9NW75 528 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 SH2B3Q9UQQ2 575 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
SCFD2-201ENST00000388940 PRRC2BQ5JSZ5 2229 aaKnown RBP14.36□□□□□ -0.11
SCFD2-201ENST00000388940 GPR37L1O60883 481 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 FGBP02675 491 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ACADLP28330 430 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 GPR1P46091 355 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 HBA1P69905 142 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 IL1RL1Q01638 556 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 MVKQ03426 396 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 PROX2Q3B8N5 592 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 SYT6Q5T7P8 510 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 FAM71E1Q6IPT2 247 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 LINC00299Q6ZSB3 139 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 CCDC80Q76M96 950 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 TSEN54Q7Z6J9 526 aaKnown RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ETFBKMTQ8IXQ9 262 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 C16orf78Q8WTQ4 265 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 IPCEF1Q8WWN9 437 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 RORBQ92753 470 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 UBE2E3Q969T4 207 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 PLEKHA8Q96JA3 519 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 HRASLS5Q96KN8 279 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 RAD9AQ99638 391 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 TMEM38AQ9H6F2 299 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 MUC22E2RYF6 1773 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 GABARAPO95166 117 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 NTRK1P04629 796 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF24P17028 368 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 PTX3P26022 381 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 PXNP49023 591 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 RPP38P78345 283 aaKnown RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 UBE3AQ05086 875 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 FADDQ13158 208 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 STARD3Q14849 445 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 SPCS2Q15005 226 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 C9orf64Q5T6V5 341 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 UNC5DQ6UXZ4 953 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 FAM124AQ86V42 546 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 TRAPPC5Q8IUR0 188 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 SVOPQ8N4V2 548 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ZBTB8BQ8NAP8 495 aaPredicted RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 OR2L2Q8NH16 312 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ING5Q8WYH8 240 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 OR8D1Q8WZ84 308 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 MAL2Q969L2 176 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF347Q96SE7 839 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 FAIMQ9NVQ4 179 aa14.35□□□□□ -0.11
SCFD2-201ENST00000388940 TCF20Q9UGU0 1960 aaKnown RBP14.35□□□□□ -0.11
SCFD2-201ENST00000388940 hCG_2014768A0A024R1R8 64 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 EDDM13A0A1B0GTR0 161 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 K7ESM1 405 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ADAMDEC1O15204 470 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PI15O43692 258 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 VEGFDO43915 354 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 KLHL18O94889 574 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 RB1P06400 928 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 C6P13671 934 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ZNF12P17014 697 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 CRATP43155 626 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 GJA8P48165 433 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 METAP1P53582 386 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 PHEXP78562 749 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 C2orf80Q0P641 193 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 CAMK2GQ13555 558 aaPredicted RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 HNRNPA1L2Q32P51 320 aaKnown RBP14.34□□□□□ -0.11
SCFD2-201ENST00000388940 ANKDD1AQ495B1 522 aa14.34□□□□□ -0.11
SCFD2-201ENST00000388940 TMEM52BQ4KMG9 183 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms