RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ADARP55265 1226 aaKnown RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 GALK2Q01415 458 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 SGSM1Q2NKQ1 1148 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 CHMP1BQ7LBR1 199 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 HOGA1Q86XE5 327 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 APLFQ8IW19 511 aaPredicted RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 CNTN4Q8IWV2 1026 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 TDHQ8IZJ6 230 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 OR5T2Q8NGG2 359 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 OR8H1Q8NGG4 311 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 OR4D10Q8NGI6 311 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 MAPK15Q8TD08 544 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 NEDD4LQ96PU5 975 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 NAP1L3Q99457 506 aaPredicted RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 FAM213AQ9BRX8 229 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 PI4K2AQ9BTU6 479 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 TRIM7Q9C029 511 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 ZNF71Q9NQZ8 489 aaPredicted RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 PRMT8Q9NR22 394 aaPredicted RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 ZCCHC3Q9NUD5 404 aaKnown RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 DBF4Q9UBU7 674 aaPredicted RBP4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 IL19Q9UHD0 177 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 APPL1Q9UKG1 709 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 ODF2LQ9ULJ1 636 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 SATB2Q9UPW6 733 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 KCNK6Q9Y257 313 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 WDR81Q562E7 1941 aa4.78□□□□□ -1.64
RNU6-40P-201ENST00000384254 SPAG9O60271 1321 aaKnown RBP4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 RNF123Q5XPI4 1314 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 C5orf51A6NDU8 294 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 HHLA1C9JL84 531 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 H0YIG0 161 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 ATP6V1G1O75348 118 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 CD48P09326 243 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 OR3A2P47893 321 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 PAX9P55771 341 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 UCP2P55851 309 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 KCNK10P57789 538 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 SP3Q02447 781 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 GUCY2DQ02846 1103 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 CDH18Q13634 790 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 GRB14Q14449 540 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 ATP1A1-AS1Q5TC04 95 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 TCEAL6Q6IPX3 200 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 FAM53AQ6NSI3 398 aaPredicted RBP4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 BTN2A1Q7KYR7 527 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 TRMT11Q7Z4G4 463 aaKnown RBP4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF410Q86VK4 478 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 ELMOD1Q8N336 334 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 CLEC1AQ8NC01 280 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 MRGPRDQ8TDS7 321 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 GANCQ8TET4 914 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 SMAP2Q8WU79 429 aaPredicted RBP4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 CHURC1Q8WUH1 139 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 PRAM1Q96QH2 718 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 F2RL3Q96RI0 385 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 TSPYL1Q9H0U9 437 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 C3orf14Q9HBI5 128 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 SDF2L1Q9HCN8 221 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 C2orf42Q9NWW7 574 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 CYP39A1Q9NYL5 469 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 POMT2Q9UKY4 750 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 FOXA2Q9Y261 457 aaPredicted RBP4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 GPRASP1Q5JY77 1395 aa4.77□□□□□ -1.65
RNU6-40P-201ENST00000384254 MTMR11A4FU01 709 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 MSGN1A6NI15 193 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 NKX6-3A6NJ46 265 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 TCP10L2B9ZVM9 353 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF195O14628 629 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 CHUKO15111 745 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 VEGFDO43915 354 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 GMNNO75496 209 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 CEACAM1P13688 526 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZNF18P17022 549 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 OR1D5P58170 312 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 KRTAP10-11P60412 298 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 EFTUD2Q15029 972 aaKnown RBP eCLIP4.76□□□□□ -1.659e-37■■■■■ 203.2
RNU6-40P-201ENST00000384254 DUSP5Q16690 384 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 LRRC37A5PQ49AS3 106 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 CNSTQ6PJW8 725 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 FIP1L1Q6UN15 594 aaKnown RBP4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 CD164L2Q6UWJ8 174 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 B3GLCTQ6Y288 498 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 C17orf107Q6ZR85 190 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 RABEPKQ7Z6M1 372 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 ZSCAN30Q86W11 494 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 DDHD1Q8NEL9 900 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 OR13C5Q8NGS8 318 aa4.76□□□□□ -1.65
RNU6-40P-201ENST00000384254 FAM46BQ96A09 425 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms