RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 BANF1O75531 89 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 SEC31AO94979 1220 aaKnown RBP12.22□□□□□ -0.45
RPAIN-202ENST00000381208 GUCA1CO95843 209 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 CD46P15529 392 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 EFNA3P52797 238 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 CASP6P55212 293 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 OR4D2P58180 307 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 REEP5Q00765 189 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 CBLBQ13191 982 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 SFT2D3Q587I9 215 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
RPAIN-202ENST00000381208 SBSNQ6UWP8 590 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 QSOX2Q6ZRP7 698 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 PDSS2Q86YH6 399 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 TMEM178AQ8NBL3 297 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 FAM98AQ8NCA5 519 aaKnown RBP12.22□□□□□ -0.45
RPAIN-202ENST00000381208 ZNF740Q8NDX6 193 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 ARMC2Q8NEN0 867 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 OR4K3Q96R72 315 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 NAPGQ99747 312 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-202ENST00000381208 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 KCNF1Q9H3M0 494 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 POPDC3Q9HBV1 291 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 LANCL2Q9NS86 450 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 SEC14L3Q9UDX4 400 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 ENTPD4Q9Y227 616 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 MYO9AB2RTY4 2548 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 SCN2AQ99250 2005 aa12.22□□□□□ -0.45
RPAIN-202ENST00000381208 IGHV3-20A0A0C4DH32 117 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 PSMD12O00232 456 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 PRMT3O60678 531 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 H2AFYO75367 372 aaKnown RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 SERPIND1P05546 499 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 SERPINA6P08185 405 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 ITGA8P53708 1063 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 STXBP1P61764 594 aaKnown RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 GNG11P61952 73 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 USP10Q14694 798 aaKnown RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 PPP1R3AQ16821 1122 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 KRTCAP3Q53RY4 240 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 RPTNQ6XPR3 784 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 FRA10AC1Q70Z53 315 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 FJX1Q86VR8 437 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 ZC3HC1Q86WB0 502 aaKnown RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 CREG2Q8IUH2 290 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 KLHL7Q8IXQ5 586 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 BEST3Q8N1M1 668 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 TCAIMQ8N3R3 496 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 OLFM1Q99784 485 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 EGFL8Q99944 293 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 SLC6A16Q9GZN6 736 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 PITHD1Q9GZP4 211 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-202ENST00000381208 RHOJQ9H4E5 214 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 PLAC1Q9HBJ0 212 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 MOCS1Q9NZB8 636 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 OARD1Q9Y530 152 aa12.21□□□□□ -0.45
RPAIN-202ENST00000381208 ITPR2Q14571 2701 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 A0A088AWK7 358 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 EFCAB8A8MWE9 144 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 E7ESA3 106 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CHST10O43529 356 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 UNC5CO95185 931 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 F10P00742 488 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 RNH1P13489 461 aaKnown RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 GNAZP19086 355 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF10P21506 573 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 SLC12A2P55011 1212 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 KCNK10P57789 538 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 SLC26A5P58743 744 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 SNRPNP63162 240 aaKnown RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 PDIA2Q13087 525 aaKnown RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 ART3Q13508 389 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 TUBA3CQ13748 450 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 ZXDCQ2QGD7 858 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CDKL4Q5MAI5 379 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CATSPEREQ5SY80 951 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF787Q6DD87 383 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 TMPRSS11BQ86T26 416 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CRLF3Q8IUI8 442 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 FBXO36Q8NEA4 188 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 THAP3Q8WTV1 239 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CDKL2Q92772 493 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CAPZA3Q96KX2 299 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 SLC17A6Q9P2U8 582 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 COPG2Q9UBF2 871 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 SLC22A14Q9Y267 594 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 MMACHCQ9Y4U1 282 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 KLF2Q9Y5W3 355 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-202ENST00000381208 MYO7BQ6PIF6 2116 aa12.2□□□□□ -0.46
RPAIN-202ENST00000381208 ZNF860A6NHJ4 632 aa12.19□□□□□ -0.46
RPAIN-202ENST00000381208 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms