RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TEX44Q53QW1 395 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 HIST2H3PS2Q5TEC6 136 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CYB5R2Q6BCY4 276 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ARSKQ6UWY0 536 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 FAM131BQ86XD5 332 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 MTURNQ8N3F0 131 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 OR2AP1Q8NGE2 309 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SLC9A6Q92581 669 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM80Q96HE8 168 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 MAP6Q96JE9 813 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 PCDHB18PQ96TA0 734 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 WRAP53Q9BUR4 548 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 GJB4Q9NTQ9 266 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 GMPR2Q9P2T1 348 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 OR10H1Q9Y4A9 318 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ZSWIM8A7E2V4 1837 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SLC35F4A4IF30 521 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CCL16O15467 120 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ZDHHC11BP0C7U3 371 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CD36P16671 472 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 LHCGRP22888 699 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 GABRR2P28476 465 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 RPS19P39019 145 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ARRB1P49407 418 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SMSP52788 366 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CASP6P55212 293 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SRPXP78539 464 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ARF5P84085 180 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 KLF1Q13351 362 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 DUSP7Q16829 419 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SYT6Q5T7P8 510 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SLC24A5Q71RS6 500 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SLC22A16Q86VW1 577 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SMARCD2Q92925 531 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CDK15Q96Q40 435 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 MTG2Q9H4K7 406 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ELAC1Q9H777 363 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 RNF121Q9H920 327 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 MIEF1Q9NQG6 463 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SARDHQ9UL12 918 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 DUSP10Q9Y6W6 482 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 VILLO15195 856 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 PIAS1O75925 651 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SGPL1O95470 568 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 VSX2P58304 361 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CRHR2Q13324 411 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 MED22Q15528 200 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 SMTNL2Q2TAL5 461 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 TAPT1Q6NXT6 567 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ZNF783Q6ZMS7 281 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CBWD2Q8IUF1 395 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 RASGEF1AQ8N9B8 481 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 OR51D1Q8NGF3 324 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ELP5Q8TE02 316 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 C2orf15Q8WU43 125 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 CDHR5Q9HBB8 845 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 PCDH12Q9NPG4 1184 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 RBFOX1Q9NWB1 397 aaKnown RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 ASIC5Q9NY37 505 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 POLHQ9Y253 713 aa4.74□□□□□ -1.65
PTPRD-203ENST00000381196 HEMK1Q9Y5R4 338 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-203ENST00000381196 GXYLT2A0PJZ3 443 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 UCHL1P09936 223 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SLC35G4P0C7Q5 338 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SPATA31D3P0C874 917 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ACRP10323 421 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TYMPP19971 482 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SOX11P35716 441 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ARF3P61204 181 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ARF1P84077 181 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 PLIN5Q00G26 463 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 RCAN2Q14206 197 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 GALEQ14376 348 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 POU6F1Q14863 301 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CBWD3Q5JTY5 395 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CBWD5Q5RIA9 395 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 C1orf189Q5VU69 101 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 MFSD7Q6UXD7 560 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 SPATA31D4Q6ZUB0 917 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 OR10R2Q8NGX6 335 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 NECAB3Q96P71 396 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TMEM246Q9BRR3 403 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 FBXO6Q9NRD1 293 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 ACTR10Q9NZ32 417 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 RBM7Q9Y580 266 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 RBMXL2O75526 392 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LTFP02788 710 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CATP04040 527 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CHMP24386 653 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 CPA2P48052 419 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 WDR4P57081 412 aaKnown RBP4.73□□□□□ -1.65
PTPRD-203ENST00000381196 VEZF1Q14119 521 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 TLR1Q15399 786 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 OLFML2AQ68BL7 652 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 GTF2IRD2BQ6EKJ0 949 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 LCLAT1Q6UWP7 414 aa4.73□□□□□ -1.65
PTPRD-203ENST00000381196 GTF2IRD2Q86UP8 949 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms