RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CPXM2Q8N436 756 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC5A8Q8N695 610 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 ASB11Q8WXH4 323 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 HRASLS5Q96KN8 279 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 CENPOQ9BU64 300 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 YIPF2Q9BWQ6 316 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 TMEM121BQ9BXQ6 578 aaPredicted RBP15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 ROGDIQ9GZN7 287 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 AGAP5A6NIR3 686 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 PTHP01270 115 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 ADRA2AP08913 450 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 FADDQ13158 208 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 HKDC1Q2TB90 917 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 LILRA6Q6PI73 481 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 SPATC1Q76KD6 591 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 NAGSQ8N159 534 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 L3MBTL4Q8NA19 623 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 GPR156Q8NFN8 814 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 GGHQ92820 318 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 NIPSNAP1Q9BPW8 284 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 SLC12A9Q9BXP2 914 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 CERS4Q9HA82 394 aa15.65■□□□□ 0.1
NKX3-1-201ENST00000380871 ANTXRLA6NF34 631 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 E7EQ34 232 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 NNMTP40261 264 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 NR4A2P43354 598 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 PFN3P60673 137 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 SF3B4Q15427 424 aaKnown RBP eCLIP15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 CCSMST1Q4G0I0 132 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 TCEAL5Q5H9L2 206 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 ATAD3BQ5T9A4 648 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 LINC00299Q6ZSB3 139 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 NLGN4XQ8N0W4 816 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 SYNPOQ8N3V7 929 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 CHCHD6Q9BRQ6 235 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 CDADC1Q9BWV3 514 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 SPHK2Q9NRA0 654 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 PSORS1C1Q9UIG5 152 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 J3KTA2 159 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 GBAP04062 536 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 ATP1B2P14415 290 aaPredicted RBP15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 MAPK1P28482 360 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 CTSKP43235 329 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 TRPC1P48995 793 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 GGTA1PQ4G0N0 100 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 COX20Q5RI15 118 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 HEATR4Q86WZ0 1026 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 C2orf73Q8N5S3 287 aaPredicted RBP15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 UTP15Q8TED0 518 aaKnown RBP15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 UNC80Q8N2C7 3258 aa15.64■□□□□ 0.09
NKX3-1-201ENST00000380871 GABRR3A8MPY1 467 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 IRF8Q02556 426 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 MESP2Q0VG99 397 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 XKR6Q5GH73 641 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 CLIP4Q8N3C7 705 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 DNAJC22Q8N4W6 341 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 OR9Q2Q8NGE9 314 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 STARD8Q92502 1023 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 EMILIN2Q9BXX0 1053 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 DNAJC11Q9NVH1 559 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 NDUFAF4Q9P032 175 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 LYVE1Q9Y5Y7 322 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PLXNB3Q9ULL4 1909 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 SUV39H1O43463 412 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 VIPR2P41587 438 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 GRIN2CQ14957 1233 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 SYTL3Q4VX76 610 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 TPRG1LQ5T0D9 272 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 LYPLAL1Q5VWZ2 237 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 DESI1Q6ICB0 168 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 FAM217AQ8IXS0 508 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 KIAA1958Q8N8K9 716 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 CSGALNACT1Q8TDX6 532 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 IPCEF1Q8WWN9 437 aaPredicted RBP15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 C11orf49Q9H6J7 331 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 HS3ST2Q9Y278 367 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 TMED5Q9Y3A6 229 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PRAMEF25A6NGN4 478 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PSMD11O00231 422 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 MYOGP15173 224 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 SYN1P17600 705 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 ALOX12P18054 663 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PRPH2P23942 346 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 CTSCP53634 463 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 NAE1Q13564 534 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 METTL2BQ6P1Q9 378 aaKnown RBP15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 ADIPOR2Q86V24 386 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PARP16Q8N5Y8 322 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 OR4K1Q8NGD4 311 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF675Q8TD23 568 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 SAMD11Q96NU1 681 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 DUSP26Q9BV47 211 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 VPS29Q9UBQ0 182 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 PCDHB11Q9Y5F2 797 aa15.63■□□□□ 0.09
NKX3-1-201ENST00000380871 AGAP14A8MT82 685 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ADORA3P0DMS8 318 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 BDKRB1P46663 353 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 CDH12P55289 794 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ARHGAP15Q53QZ3 475 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms