RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ASCL3Q9NQ33 180 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 CUTCQ9NTM9 273 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 FOXJ2Q9P0K8 574 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 NEUROG3Q9Y4Z2 214 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 PTGDR2Q9Y5Y4 395 aa17.88■□□□□ 0.45
SMN2-202ENST00000380742 SERTM1A2A2V5 107 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 TCP11X1B4DZS4 312 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 KIAA0754O94854 1291 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 B3GALT4O96024 378 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 ZNF888P0CJ79 500 aaPredicted RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 PTX3P26022 381 aaPredicted RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 STXBP1P61764 594 aaKnown RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 ZNF33BQ06732 778 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 DEPDC1Q5TB30 811 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 TMEM164Q5U3C3 297 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 YOD1Q5VVQ6 348 aaPredicted RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 GARNL3Q5VVW2 1013 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 KHDRBS2Q5VWX1 349 aaKnown RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 RHBDD2Q6NTF9 364 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 IGF2-ASQ6U949 168 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 TTLL10Q6ZVT0 673 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 PRSS41Q7RTY9 318 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 TRIM46Q7Z4K8 759 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 SPRY4Q9C004 299 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 B3GNT4Q9C0J1 378 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 REXO4Q9GZR2 422 aaKnown RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 CCDC134Q9H6E4 229 aa17.87■□□□□ 0.45
SMN2-202ENST00000380742 DHCR7Q9UBM7 475 aaKnown RBP17.87■□□□□ 0.45
SMN2-202ENST00000380742 CCDC88CQ9P219 2028 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 CDRT15L2A8MXV6 281 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SAP18O00422 153 aaKnown RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 NVLO15381 856 aaKnown RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 FOXS1O43638 330 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SKAP2O75563 359 aaPredicted RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 CHEK2O96017 543 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 JUNP05412 331 aaKnown RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 HSD3B1P14060 373 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 HSD3B2P26439 372 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 RBMS1P29558 406 aaKnown RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 SLC5A2P31639 672 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 ARSFP54793 590 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 RAB8AP61006 207 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 HMGCS1Q01581 520 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 CSTF3Q12996 717 aaKnown RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 CUL3Q13618 768 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 MUM1Q2TAK8 710 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 RNF165Q6ZSG1 346 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 FAM47EQ6ZV65 393 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 CHSY3Q70JA7 882 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 UBE3DQ7Z6J8 389 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 CRLF3Q8IUI8 442 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 AFAP1L2Q8N4X5 818 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 OR2L5Q8NG80 312 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 GAL3ST3Q96A11 431 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SERPINI1Q99574 410 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 ACPTQ9BZG2 426 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 ULBP3Q9BZM4 244 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 MARCOQ9UEW3 520 aaPredicted RBP17.86■□□□□ 0.45
SMN2-202ENST00000380742 SLC12A4Q9UP95 1085 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SRPK3Q9UPE1 567 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 MSRB2Q9Y3D2 182 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SLC22A7Q9Y694 548 aa17.86■□□□□ 0.45
SMN2-202ENST00000380742 SCN2AQ99250 2005 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 SEC16AO15027 2179 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 A0A0G2JN53 185 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 URADA6NGE7 173 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 DSCR3O14972 297 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 PIP5K1BO14986 540 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 POLR3GO15318 223 aaPredicted RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 ERI3O43414 337 aaKnown RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 BRINP1O60477 761 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 CPNE3O75131 537 aaKnown RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 DXOO77932 396 aaKnown RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 STK17BO94768 372 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 LINC00032P0C843 101 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 KITP10721 976 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 ALOX12P18054 663 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 IL1RNP18510 177 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 ALAS2P22557 587 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 PLA2G16P53816 162 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 FAM53BQ14153 422 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 PDCD2Q16342 344 aaPredicted RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 NDUFA9Q16795 377 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 TMEM35AQ53FP2 167 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 C1orf189Q5VU69 101 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 ABHD17CQ6PCB6 329 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 PDSS2Q86YH6 399 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 GBP7Q8N8V2 638 aaPredicted RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 PIWIL2Q8TC59 973 aaKnown RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 CLIP3Q96DZ5 547 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 C3orf30Q96M34 536 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 SLC7A5P2Q9GIP4 190 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 PRDM7Q9NQW5 492 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 NDOR1Q9UHB4 597 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 CCL27Q9Y4X3 112 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 TMEM184BQ9Y519 407 aaPredicted RBP17.85■□□□□ 0.45
SMN2-202ENST00000380742 PCDHGA7Q9Y5G6 932 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 AK5Q9Y6K8 562 aa17.85■□□□□ 0.45
SMN2-202ENST00000380742 A0A0A6YYC8 382 aaPredicted RBP17.84■□□□□ 0.45
SMN2-202ENST00000380742 TEX51A0A1B0GUA7 166 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms