RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PTCHD1Q96NR3 888 aa21.68■■□□□ 1.06
U2AF1-202ENST00000380276 SGPP1Q9BX95 441 aa21.68■■□□□ 1.06
U2AF1-202ENST00000380276 RHBGQ9H310 441 aa21.68■■□□□ 1.06
U2AF1-202ENST00000380276 ARL15Q9NXU5 204 aa21.68■■□□□ 1.06
U2AF1-202ENST00000380276 PPT2Q9UMR5 302 aa21.68■■□□□ 1.06
U2AF1-202ENST00000380276 NCOA6Q14686 2063 aaPredicted RBP21.68■■□□□ 1.06
U2AF1-202ENST00000380276 A8MUA0 341 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 NME2P1O60361 137 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 GALR3O60755 368 aaPredicted RBP21.67■■□□□ 1.06
U2AF1-202ENST00000380276 DNAJB6O75190 326 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 ZNF888P0CJ79 500 aaPredicted RBP21.67■■□□□ 1.06
U2AF1-202ENST00000380276 NPPBP16860 134 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 ALOX12P18054 663 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 NME2P22392 152 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 HNF4AP41235 474 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 CYB561P49447 251 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 RGS1Q08116 209 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 DHX9Q08211 1270 aaKnown RBP21.67■■□□□ 1.06
U2AF1-202ENST00000380276 PHKG1Q16816 387 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 PAQR3Q6TCH7 311 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 DOLPP1Q86YN1 238 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 EID3Q8N140 333 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 GABPB2Q8TAK5 448 aaPredicted RBP21.67■■□□□ 1.06
U2AF1-202ENST00000380276 ELP5Q8TE02 316 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 CA5BP1Q8WTZ4 195 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 SDCCAG3Q96C92 435 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 TRIM51Q9BSJ1 452 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 COQ3Q9NZJ6 369 aa21.67■■□□□ 1.06
U2AF1-202ENST00000380276 PKDREJQ9NTG1 2253 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 TFECO14948 347 aaPredicted RBP21.66■■□□□ 1.06
U2AF1-202ENST00000380276 SLC16A5O15375 505 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 CDC40O60508 579 aaKnown RBP eCLIP21.66■■□□□ 1.06
U2AF1-202ENST00000380276 ITGA8P53708 1063 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 ABHD13Q7L211 337 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 AGGF1Q8N302 714 aaeCLIP21.66■■□□□ 1.06
U2AF1-202ENST00000380276 SNF8Q96H20 258 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 TRIM54Q9BYV2 358 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 CSMD2Q7Z408 3487 aa21.66■■□□□ 1.06
U2AF1-202ENST00000380276 PDZD2O15018 2839 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 TRBC2A0A5B9 178 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 PSMD12O00232 456 aaPredicted RBP21.65■■□□□ 1.06
U2AF1-202ENST00000380276 FCHO1O14526 889 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 PRMT3O60678 531 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 TPOP07202 933 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 PTGER1P34995 402 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 RFC3P40938 356 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 KRTAP10-9P60411 292 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 BTG2P78543 158 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 TLE4Q04727 773 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 PDAP1Q13442 181 aaKnown RBP21.65■■□□□ 1.06
U2AF1-202ENST00000380276 CATSPEREQ5SY80 951 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 RBM20Q5T481 1227 aaKnown RBP21.65■■□□□ 1.06
U2AF1-202ENST00000380276 MEX3BQ6ZN04 569 aaKnown RBP21.65■■□□□ 1.06
U2AF1-202ENST00000380276 AFAP1L2Q8N4X5 818 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 SIGLEC10Q96LC7 697 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 DEFB126Q9BYW3 111 aa21.65■■□□□ 1.06
U2AF1-202ENST00000380276 SAGE2PA6NJ88 616 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 E9PLN8 166 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 GUCA1CO95843 209 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 MAOAP21397 527 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 MEOX1P50221 254 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 CDKN2DP55273 166 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 MLF1P58340 268 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 RAB8AP61006 207 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 PWP1Q13610 501 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 CSHL1Q14406 222 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 RNFT1Q5M7Z0 435 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 DUPD1Q68J44 220 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 NIPAL1Q6NVV3 410 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 CCDC137Q6PK04 289 aaKnown RBP21.64■■□□□ 1.05
U2AF1-202ENST00000380276 CDH24Q86UP0 819 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 C2CD4AQ8NCU7 369 aaPredicted RBP21.64■■□□□ 1.05
U2AF1-202ENST00000380276 ABHD11Q8NFV4 315 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 PHF10Q8WUB8 498 aaKnown RBP21.64■■□□□ 1.05
U2AF1-202ENST00000380276 TSNARE1Q96NA8 513 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 OLFM1Q99784 485 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 VKORC1Q9BQB6 163 aa21.64■■□□□ 1.05
U2AF1-202ENST00000380276 KLF13Q9Y2Y9 288 aaPredicted RBP21.64■■□□□ 1.05
U2AF1-202ENST00000380276 PGAM1P18669 254 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 IL2P60568 153 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 TIAL1Q01085 375 aaKnown RBP eCLIP21.63■■□□□ 1.05
U2AF1-202ENST00000380276 HYAL2Q12891 473 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 CRYMQ14894 314 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 QSOX2Q6ZRP7 698 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 NAT8LQ8N9F0 302 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 ARMC2Q8NEN0 867 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 SLC5A11Q8WWX8 675 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 MS4A14Q96JA4 679 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 SPNS1Q9H2V7 528 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 DYRK1BQ9Y463 629 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 ASB1Q9Y576 335 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 PCNX1Q96RV3 2341 aa21.63■■□□□ 1.05
U2AF1-202ENST00000380276 A0A1B0GTH9 108 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 URADA6NGE7 173 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 PTGS2P35354 604 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 MAGEA3P43357 314 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 HLCSP50747 726 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 RBBP5Q15291 538 aaKnown RBP21.62■■□□□ 1.05
U2AF1-202ENST00000380276 CEP128Q6ZU80 1094 aa21.62■■□□□ 1.05
U2AF1-202ENST00000380276 CD163Q86VB7 1156 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms